RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 FAF2Q96CS3 445 aa13.14□□□□□ -0.31
MTHFD1-208ENST00000554739 HSPA12BQ96MM6 686 aa13.14□□□□□ -0.31
MTHFD1-208ENST00000554739 HEPHQ9BQS7 1158 aa13.14□□□□□ -0.31
MTHFD1-208ENST00000554739 ZNF670Q9BS34 389 aa13.14□□□□□ -0.31
MTHFD1-208ENST00000554739 CALN1Q9BXU9 219 aa13.14□□□□□ -0.31
MTHFD1-208ENST00000554739 PCED1AQ9H1Q7 454 aa13.14□□□□□ -0.31
MTHFD1-208ENST00000554739 C6orf106Q9H6K1 298 aaPredicted RBP13.14□□□□□ -0.31
MTHFD1-208ENST00000554739 VPS45Q9NRW7 570 aa13.14□□□□□ -0.31
MTHFD1-208ENST00000554739 KLHL11Q9NVR0 708 aa13.14□□□□□ -0.31
MTHFD1-208ENST00000554739 IL36AQ9UHA7 158 aa13.14□□□□□ -0.31
MTHFD1-208ENST00000554739 IPO11Q9UI26 975 aaKnown RBP13.14□□□□□ -0.31
MTHFD1-208ENST00000554739 WASF2Q9Y6W5 498 aa13.14□□□□□ -0.31
MTHFD1-208ENST00000554739 C3orf70A6NLC5 250 aaPredicted RBP13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 BTNL10A8MVZ5 291 aa13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 GOLGA6L6A8MZA4 724 aa13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 C1QTNF3-AMACRE9PGA6 284 aa13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 PLK4O00444 970 aa13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 LEFTY1O75610 366 aa13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 PRNPP04156 253 aa13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 CCNHP51946 323 aaPredicted RBP13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 VAV2P52735 878 aa13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 IL10RBQ08334 325 aa13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 CNTN1Q12860 1018 aa13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 POM121L1PQ3SYA9 428 aa13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 PEAR1Q5VY43 1037 aaPredicted RBP13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 RHOT1Q8IXI2 618 aa13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 PQLC3Q8N755 202 aa13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 TPCN2Q8NHX9 752 aa13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 TM6SF2Q9BZW4 377 aa13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 GOLPH3Q9H4A6 298 aa13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 SMOC1Q9H4F8 434 aa13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 GRPEL1Q9HAV7 217 aa13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 UBA2Q9UBT2 640 aaPredicted RBP13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 SPTBN4Q9H254 2564 aa13.13□□□□□ -0.31
MTHFD1-208ENST00000554739 KPNA3O00505 521 aaPredicted RBP13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 SLC7A4O43246 635 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 SPOPO43791 374 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 MAFKO60675 156 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 POP4O95707 220 aaKnown RBP13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 PEX11BO96011 259 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 MAOBP27338 520 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 GKP32189 559 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 HOXD12P35452 270 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 DPP6P42658 865 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 RHOAP61586 193 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 SNRPD1P62314 119 aaKnown RBP13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 PAFAH1B3Q15102 231 aaKnown RBP13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 SF3A2Q15428 464 aaKnown RBP13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 WDR45BQ5MNZ6 344 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 SYCP2LQ5T4T6 812 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 ATXN7L2Q5T6C5 722 aaPredicted RBP13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 AGBL4Q5VU57 503 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 DCAF12L1Q5VU92 463 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 C11orf63Q6NUN7 778 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 RYBPQ8N488 228 aaPredicted RBP13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 OR2T34Q8NGX1 318 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 OR6K2Q8NGY2 324 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 C1orf216Q8TAB5 229 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 GRIN3AQ8TCU5 1115 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 ARRDC3Q96B67 414 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 LRIG1Q96JA1 1093 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 CALR3Q96L12 384 aaKnown RBP13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 RNF157Q96PX1 679 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 DESI2Q9BSY9 194 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 HDAC8Q9BY41 377 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 LHX3Q9UBR4 397 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 CEP250Q9BV73 2442 aa13.12□□□□□ -0.31
MTHFD1-208ENST00000554739 A0A0U1RQJ8 604 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 LRRD1A4D1F6 860 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 GOLGA6L3A6NEY3 463 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 LRRC72A6NJI9 287 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 ZNF487B1APH4 448 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 PATE3B3GLJ2 98 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 KRIT1O00522 736 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 FOXD2O60548 495 aaPredicted RBP13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 PALMO75781 387 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 IGHV4-34P06331 123 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 TNNT1P13805 278 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 SERPINB6P35237 376 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 ADPRHP54922 357 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 TAS2R38P59533 333 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 SLC10A7Q0GE19 358 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 RFTN1Q14699 578 aaPredicted RBP13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 TAZQ16635 292 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 ZFYVE27Q5T4F4 411 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 PIP5KL1Q5T9C9 394 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 NCBP2-AS2Q69YL0 99 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 TCEAL6Q6IPX3 200 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 NCEH1Q6PIU2 408 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 PRR23CQ6ZRP0 262 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 VSIG1Q86XK7 387 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 LRRC49Q8IUZ0 686 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 RGL4Q8IZJ4 473 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 TSEN2Q8NCE0 465 aaKnown RBP13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 OR14C36Q8NHC7 312 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 TCEAL3Q969E4 200 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 RNF25Q96BH1 459 aaPredicted RBP13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 BIRC7Q96CA5 298 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 GDAP1L1Q96MZ0 367 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms