RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 PRKCQQ04759 706 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 YWHAHQ04917 246 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 TRIM25Q14258 630 aaKnown RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PFKFB4Q16877 469 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 KCTD19Q17RG1 926 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 TCTE1Q5JU00 501 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 FAM26FQ5R3K3 315 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 ATAT1Q5SQI0 421 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 OR7E24Q6IFN5 339 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 WDR93Q6P2C0 686 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 LILRA6Q6PI73 481 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 ZC3H14Q6PJT7 736 aaKnown RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 SRGAP1Q7Z6B7 1085 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PALM2Q8IXS6 379 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 THNSL1Q8IYQ7 743 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 HACE1Q8IYU2 909 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 SPARTQ8N0X7 666 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 TCAIMQ8N3R3 496 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 SUMF1Q8NBK3 374 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 CCDC150Q8NCX0 1101 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 OR9A1PQ8NGU1 263 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 ZNF507Q8TCN5 953 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 CCDC12Q8WUD4 166 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 SLC47A1Q96FL8 570 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 MSANTD3Q96H12 275 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 AHCYL2Q96HN2 611 aaKnown RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 FAM84AQ96KN4 292 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PIP5K1AQ99755 562 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 TXN2Q99757 166 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 NTMT1Q9BV86 223 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 APOL6Q9BWW8 343 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 CCSER1Q9C0I3 900 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 REXO4Q9GZR2 422 aaKnown RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PLEKHA4Q9H4M7 779 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PREBQ9HCU5 417 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 MRPL40Q9NQ50 206 aaKnown RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 SH2B1Q9NRF2 756 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 SNX15Q9NRS6 342 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.78□□□□□ -1.96
PRPF39-206ENST00000554429 CHST7Q9NS84 486 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 PGPEP1Q9NXJ5 209 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 TRPM5Q9NZQ8 1165 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 KLHL9Q9P2J3 617 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 KCNH3Q9ULD8 1083 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 SNX13Q9Y5W8 968 aa2.78□□□□□ -1.96
PRPF39-206ENST00000554429 CLUHO75153 1309 aa2.78□□□□□ -1.97
PRPF39-206ENST00000554429 KMT2BQ9UMN6 2715 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 MYO10Q9HD67 2058 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 PMS2P1A4D2B8 440 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 URADA6NGE7 173 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 AQP12BA6NM10 295 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 GOLGA8BA8MQT2 603 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 RHPN2P1A8MT19 583 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 LGALS16A8MUM7 142 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 FAM86B1E9PN63 330 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 STX16-NPEPL1H3BU86 382 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 TMEM189-UBE2V1I3L0A0 370 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 MYO1CO00159 1063 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 TAF4O00268 1085 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 TBC1D4O60343 1298 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 GCATO75600 419 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 PSMD10O75832 226 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 LYPLA2O95372 231 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 MLYCDO95822 493 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 LMNAP02545 664 aaKnown RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 ALBP02768 609 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 FGF4P08620 206 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 HNRNPA1P09651 372 aaKnown RBP eCLIP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 FAM86B2P0C5J1 330 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 RPA1P27694 616 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 HOXA6P31267 233 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 ARCN1P48444 511 aaKnown RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 PMS2P54278 862 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 HNRNPH2P55795 449 aaKnown RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 IL2P60568 153 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 MC1RQ01726 317 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 DSC2Q02487 901 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 HTR4Q13639 388 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 AUHQ13825 339 aaKnown RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 ANGPT1Q15389 498 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 HFEQ30201 348 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 ADCK5Q3MIX3 580 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 HSF5Q4G112 596 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 FBLN7Q53RD9 439 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 XKR3Q5GH77 459 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 NOMO2Q5JPE7 1267 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 PLPP4Q5VZY2 271 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 TRAT1Q6PIZ9 186 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 APOA5Q6Q788 366 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 ZNF704Q6ZNC4 412 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 RFX8Q6ZV50 586 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 Q6ZVU0 165 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 FRMD5Q7Z6J6 570 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 TADA2BQ86TJ2 420 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 SLC15A3Q8IY34 581 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 ADSSL1Q8N142 457 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 MFSD2AQ8NA29 543 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 LRRN4CLQ8ND94 238 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 ETNPPLQ8TBG4 499 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 GPR152Q8TDT2 470 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms