RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 CER1O95813 267 aa13.31□□□□□ -0.28
SHMT2-211ENST00000554310 CYP1A2P05177 515 aa13.31□□□□□ -0.28
SHMT2-211ENST00000554310 TNNT1P13805 278 aa13.31□□□□□ -0.28
SHMT2-211ENST00000554310 CSRP1P21291 193 aaKnown RBP13.31□□□□□ -0.28
SHMT2-211ENST00000554310 NUDT1P36639 197 aa13.31□□□□□ -0.28
SHMT2-211ENST00000554310 METAP1P53582 386 aa13.31□□□□□ -0.28
SHMT2-211ENST00000554310 CNTN1Q12860 1018 aa13.31□□□□□ -0.28
SHMT2-211ENST00000554310 PIGHQ14442 188 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-211ENST00000554310 UAP1L1Q3KQV9 507 aa13.31□□□□□ -0.28
SHMT2-211ENST00000554310 CARD16Q5EG05 197 aa13.31□□□□□ -0.28
SHMT2-211ENST00000554310 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-211ENST00000554310 DPY19L3Q6ZPD9 716 aa13.31□□□□□ -0.28
SHMT2-211ENST00000554310 CYP4V2Q6ZWL3 525 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-211ENST00000554310 PLPP6Q8IY26 295 aa13.31□□□□□ -0.28
SHMT2-211ENST00000554310 NIPA2Q8N8Q9 360 aa13.31□□□□□ -0.28
SHMT2-211ENST00000554310 CHST14Q8NCH0 376 aa13.31□□□□□ -0.28
SHMT2-211ENST00000554310 OR8K1Q8NGG5 319 aa13.31□□□□□ -0.28
SHMT2-211ENST00000554310 GRIN3AQ8TCU5 1115 aa13.31□□□□□ -0.28
SHMT2-211ENST00000554310 CASKIN2Q8WXE0 1202 aa13.31□□□□□ -0.28
SHMT2-211ENST00000554310 BAG1Q99933 345 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-211ENST00000554310 ORAI3Q9BRQ5 295 aa13.31□□□□□ -0.28
SHMT2-211ENST00000554310 NOL6Q9H6R4 1146 aaKnown RBP13.31□□□□□ -0.28
SHMT2-211ENST00000554310 TM9SF3Q9HD45 589 aa13.31□□□□□ -0.28
SHMT2-211ENST00000554310 DYRK4Q9NR20 520 aa13.31□□□□□ -0.28
SHMT2-211ENST00000554310 ZNHIT6Q9NWK9 470 aaKnown RBP13.31□□□□□ -0.28
SHMT2-211ENST00000554310 GPATCH2LQ9NWQ4 482 aa13.31□□□□□ -0.28
SHMT2-211ENST00000554310 PCSK1NQ9UHG2 260 aa13.31□□□□□ -0.28
SHMT2-211ENST00000554310 CHD8Q9HCK8 2581 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 SSU72P8A0A1W2PR75 194 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 USP27XA6NNY8 438 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 RASA4BC9J798 803 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 RASA4O43374 803 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 LATO43561 262 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 MFAP3LO75121 409 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 KCNK5O95279 499 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 CD160O95971 181 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 GSRP00390 522 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 FECHP22830 423 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 EIF4A3P38919 411 aaKnown RBP13.3□□□□□ -0.28
SHMT2-211ENST00000554310 CCNHP51946 323 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-211ENST00000554310 NDST2P52849 883 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 RACK1P63244 317 aaKnown RBP13.3□□□□□ -0.28
SHMT2-211ENST00000554310 SLC14A1Q13336 389 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 SLC18A3Q16572 532 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 CA9Q16790 459 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 POM121L1PQ3SYA9 428 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 CCDC122Q5T0U0 273 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 PIP5KL1Q5T9C9 394 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 RFX8Q6ZV50 586 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 TRIM69Q86WT6 500 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 ZNF354CQ86Y25 554 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 CNGA4Q8IV77 575 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 MYRIPQ8NFW9 859 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 HMCESQ96FZ2 354 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 LRIG1Q96JA1 1093 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 C16orf45Q96MC5 204 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-211ENST00000554310 KCTD15Q96SI1 283 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-211ENST00000554310 HEPHQ9BQS7 1158 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 NUP85Q9BW27 656 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 HDAC8Q9BY41 377 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 PREBQ9HCU5 417 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 ABHD10Q9NUJ1 306 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 IP6K2Q9UHH9 426 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 ANAPC7Q9UJX3 599 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 SLCO1B1Q9Y6L6 691 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 WASF2Q9Y6W5 498 aa13.3□□□□□ -0.28
SHMT2-211ENST00000554310 CABIN1Q9Y6J0 2220 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 ACACBO00763 2458 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 TBC1D3DA0A087WVF3 549 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 TBC1D3IA0A087WXS9 549 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 TBC1D3EA0A087X179 549 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 TBC1D3KA0A087X1G2 549 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 TBC1D3FA6NER0 549 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-211ENST00000554310 TBC1D3LB9A6J9 549 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 PLK4O00444 970 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 ZSCAN12O43309 604 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 BUB1O43683 1085 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 LEFTY1O75610 366 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 GJB3O75712 270 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 TMCC1O94876 653 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 ADRB1P08588 477 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 TBC1D3HP0C7X1 549 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 KCNA4P22459 653 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 ITGB7P26010 798 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 HCAR3P49019 387 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 NOVA1P51513 510 aaKnown RBP13.29□□□□□ -0.28
SHMT2-211ENST00000554310 DNA2P51530 1060 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 SNRPD1P62314 119 aaKnown RBP13.29□□□□□ -0.28
SHMT2-211ENST00000554310 PPP2CBP62714 309 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 PPP2CAP67775 309 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 MAPK8IP2Q13387 824 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-211ENST00000554310 SERINC3Q13530 473 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 DPYSL2Q16555 572 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 TSR1Q2NL82 804 aaKnown RBP13.29□□□□□ -0.28
SHMT2-211ENST00000554310 BOLA3Q53S33 107 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 INO80DQ53TQ3 878 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-211ENST00000554310 PPP6R3Q5H9R7 873 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-211ENST00000554310 TBC1D3GQ6DHY5 549 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 TBC1D3CQ6IPX1 549 aa13.29□□□□□ -0.28
SHMT2-211ENST00000554310 PSAPL1Q6NUJ1 521 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms