RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 FRG1Q14331 258 aaKnown RBP12.89□□□□□ -0.35
CACNB3-223ENST00000552480 TMED2Q15363 201 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 SLC14A2Q15849 920 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 ZNF77Q15935 545 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 KBTBD12Q3ZCT8 623 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 SPANXN3Q5MJ09 141 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 ARMC3Q5W041 872 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 ADGRD1Q6QNK2 874 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 LEKR1Q6ZMV7 388 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 MFN1Q8IWA4 741 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 CCDC117Q8IWD4 279 aaPredicted RBP12.89□□□□□ -0.35
CACNB3-223ENST00000552480 ARRDC2Q8TBH0 407 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 DDI1Q8WTU0 396 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 APOL2Q9BQE5 337 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 CINPQ9BW66 212 aaPredicted RBP12.89□□□□□ -0.35
CACNB3-223ENST00000552480 FSD1LQ9BXM9 530 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 IL22Q9GZX6 179 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 PIH1D1Q9NWS0 290 aaKnown RBP12.89□□□□□ -0.35
CACNB3-223ENST00000552480 OR51B4Q9Y5P0 310 aa12.89□□□□□ -0.35
CACNB3-223ENST00000552480 NOTCH4Q99466 2003 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 FAM237BA0A1B0GVD1 139 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 FAM159BA6NKW6 160 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 CBX4O00257 560 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 PMPCBO75439 489 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 ZMPSTE24O75844 475 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 ALDH1A2O94788 518 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 PRAMEF12O95522 483 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 CYBBP04839 570 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 POLBP06746 335 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 GLDCP23378 1020 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 WEE1P30291 646 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 CSKP41240 450 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 CD86P42081 329 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 WNT3AP56704 352 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 MAXP61244 160 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 NAB1Q13506 487 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 CRYMQ14894 314 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 FSCBQ5H9T9 825 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 CERCAMQ5T4B2 595 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 DENND5AQ6IQ26 1287 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 ZNF449Q6P9G9 518 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 RANBP10Q6VN20 620 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 CYP4X1Q8N118 509 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 DCAF4L2Q8NA75 395 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 VN1R2Q8NFZ6 395 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 WFDC5Q8TCV5 224 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 DCAKDQ8WVC6 231 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 SLC44A1Q8WWI5 657 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 PPP2R3CQ969Q6 453 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 MRPL38Q96DV4 380 aaKnown RBP12.88□□□□□ -0.35
CACNB3-223ENST00000552480 PSKH2Q96QS6 385 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 MGME1Q9BQP7 344 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 FEM1AQ9BSK4 669 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 CNOT10Q9H9A5 744 aaKnown RBP12.88□□□□□ -0.35
CACNB3-223ENST00000552480 KIF9Q9HAQ2 790 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 ARNT2Q9HBZ2 717 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 MOCS1Q9NZB8 636 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 TBC1D14Q9P2M4 693 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 TBK1Q9UHD2 729 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 SOX13Q9UN79 622 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 MRPS23Q9Y3D9 190 aaKnown RBP12.88□□□□□ -0.35
CACNB3-223ENST00000552480 ACTL7BQ9Y614 415 aa12.88□□□□□ -0.35
CACNB3-223ENST00000552480 NUP210Q8TEM1 1887 aaPredicted RBP12.87□□□□□ -0.35
CACNB3-223ENST00000552480 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.87□□□□□ -0.35
CACNB3-223ENST00000552480 MUSKO15146 869 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 USP1O94782 785 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 CES1P23141 567 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 MZF1P28698 734 aaPredicted RBP12.87□□□□□ -0.35
CACNB3-223ENST00000552480 BMP8BP34820 402 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 ATP1A2P50993 1020 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 ARF5P84085 180 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 CYTH1Q15438 398 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 PCID2Q5JVF3 399 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 FYB2Q5VWT5 728 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 POTEHQ6S545 545 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 TPGS1Q6ZTW0 290 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 TMEM135Q86UB9 458 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 TRABD2AQ86V40 505 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 EXOC3L1Q86VI1 746 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 SLC26A11Q86WA9 606 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 LRRC6Q86X45 466 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 C12orf76Q8N812 135 aaPredicted RBP12.87□□□□□ -0.35
CACNB3-223ENST00000552480 KIAA1958Q8N8K9 716 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 FIBINQ8TAL6 211 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 RIN3Q8TB24 985 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 ITFG1Q8TB96 612 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 PTCD2Q8WV60 388 aaKnown RBP12.87□□□□□ -0.35
CACNB3-223ENST00000552480 ING5Q8WYH8 240 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 TTC17Q96AE7 1141 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 OTUB2Q96DC9 234 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 MRRFQ96E11 262 aaKnown RBP12.87□□□□□ -0.35
CACNB3-223ENST00000552480 ALG14Q96F25 216 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 ZSWIM3Q96MP5 696 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 SEMA3CQ99985 751 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 TRIM56Q9BRZ2 755 aaKnown RBP12.87□□□□□ -0.35
CACNB3-223ENST00000552480 MRM3Q9HC36 420 aaKnown RBP12.87□□□□□ -0.35
CACNB3-223ENST00000552480 PSD3Q9NYI0 1048 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 SENP1Q9P0U3 644 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 ZNF180Q9UJW8 692 aa12.87□□□□□ -0.35
CACNB3-223ENST00000552480 VPS28Q9UK41 221 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms