RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 LRRC24Q50LG9 513 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 DNTTIP2Q5QJE6 756 aaKnown RBP6.47□□□□□ -1.37
VPS29-210ENST00000552130 TAF8Q7Z7C8 310 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 TLK2Q86UE8 772 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 TICAM1Q8IUC6 712 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 Q8N1X5 172 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 MINDY1Q8N5J2 469 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 IQUBQ8NA54 791 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 PHOSPHO1Q8TCT1 267 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 CALML6Q8TD86 181 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 CLEC4DQ8WXI8 215 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 RABGGTAQ92696 567 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 SPACA9Q96E40 222 aaPredicted RBP6.47□□□□□ -1.37
VPS29-210ENST00000552130 ALG14Q96F25 216 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 PEX11GQ96HA9 241 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 ERO1AQ96HE7 468 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 WDFY2Q96P53 400 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 HERC2P3Q9BVR0 1158 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 TEX13AQ9BXU3 409 aaPredicted RBP6.47□□□□□ -1.37
VPS29-210ENST00000552130 TRIM31Q9BZY9 425 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 TINAGL1Q9GZM7 467 aaPredicted RBP6.47□□□□□ -1.37
VPS29-210ENST00000552130 SCAND2PQ9GZW5 306 aaPredicted RBP6.47□□□□□ -1.37
VPS29-210ENST00000552130 SLC25A32Q9H2D1 315 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 LIN7CQ9NUP9 197 aaKnown RBP6.47□□□□□ -1.37
VPS29-210ENST00000552130 EXOC1Q9NV70 894 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 SOHLH2Q9NX45 425 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 ALKBH4Q9NXW9 302 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.47□□□□□ -1.37
VPS29-210ENST00000552130 MPP6Q9NZW5 540 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 ASH2LQ9UBL3 628 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 CDH22Q9UJ99 828 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 NUDT5Q9UKK9 219 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 CDH7Q9ULB5 785 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 NFU1Q9UMS0 254 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 NEU2Q9Y3R4 380 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 CHTOPQ9Y3Y2 248 aaKnown RBP6.47□□□□□ -1.37
VPS29-210ENST00000552130 FAM205AQ6ZU69 1335 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 WDR19Q8NEZ3 1342 aa6.47□□□□□ -1.37
VPS29-210ENST00000552130 ZNF335Q9H4Z2 1342 aaPredicted RBP6.47□□□□□ -1.37
VPS29-210ENST00000552130 TCRBV21S2A2A0A5A6 115 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 EME2A4GXA9 379 aaPredicted RBP6.46□□□□□ -1.38
VPS29-210ENST00000552130 PRSS29PA6NIE9 313 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 FAM90A7PA6NKC0 464 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 FAM90A22PA8MWA6 464 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 FAM90A12PA8MX19 464 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 CDRT15L2A8MXV6 281 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 FAM90A23PA8MXZ1 464 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 SLC33A1O00400 549 aaPredicted RBP6.46□□□□□ -1.38
VPS29-210ENST00000552130 DHHO43323 396 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 PRAMEF4O60810 478 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 TADA2AO75478 443 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 ZBTB7AO95365 584 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 CER1O95813 267 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 MMP2P08253 660 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 COX7A2P14406 83 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 AGAP20933 346 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 RDXP35241 583 aaKnown RBP6.46□□□□□ -1.38
VPS29-210ENST00000552130 GNL1P36915 607 aaPredicted RBP6.46□□□□□ -1.38
VPS29-210ENST00000552130 SREBF1P36956 1147 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 PTDSS1P48651 473 aaKnown RBP6.46□□□□□ -1.38
VPS29-210ENST00000552130 KHKP50053 298 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 ADARP55265 1226 aaKnown RBP6.46□□□□□ -1.38
VPS29-210ENST00000552130 NME5P56597 212 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 KIAA1024LP59773 190 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 MTM1Q13496 603 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 IL11RAQ14626 422 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 LETM2Q2VYF4 491 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 LEXMQ3ZCV2 418 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 HS1BP3Q53T59 392 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 TEX35Q5T0J7 233 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 CCDC122Q5T0U0 273 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 STXBP5Q5T5C0 1151 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 CTR9Q6PD62 1173 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 MFSD7Q6UXD7 560 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 ABHD15Q6UXT9 468 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 ZNF365Q70YC5 407 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 MED25Q71SY5 747 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 SPATA19Q7Z5L4 167 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 MB21D1Q8N884 522 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 PI4KAP1Q8N8J0 262 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 KDM1BQ8NB78 822 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 SUN5Q8TC36 379 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 ST7LQ8TDW4 575 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 SMARCE1Q969G3 411 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 KLHL29Q96CT2 875 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 LOXL4Q96JB6 756 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 CD180Q99467 661 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 LZTS2Q9BRK4 669 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 MECRQ9BV79 373 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 CCDC94Q9BW85 323 aaPredicted RBP6.46□□□□□ -1.38
VPS29-210ENST00000552130 WNT5BQ9H1J7 359 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 DENND2DQ9H6A0 471 aaPredicted RBP6.46□□□□□ -1.38
VPS29-210ENST00000552130 BCO1Q9HAY6 547 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 LANCL2Q9NS86 450 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 MTUS1Q9ULD2 1270 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 NENFQ9UMX5 172 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 HPSEQ9Y251 543 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 ENTPD2Q9Y5L3 495 aa6.46□□□□□ -1.38
VPS29-210ENST00000552130 A0A1W2PQM1 296 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 A0A1W2PR48 441 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms