RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 SMAD6O43541 496 aaKnown RBP14.74□□□□□ -0.05
VPS29-209ENST00000551655 DUX1O43812 170 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 SNAP91O60641 907 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 SEMA7AO75326 666 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 ENDOD1O94919 500 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 CALCAP01258 141 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 CCL4P13236 92 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 RRM1P23921 792 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 GGCXP38435 758 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 RPS21P63220 83 aaKnown RBP14.74□□□□□ -0.05
VPS29-209ENST00000551655 PITX1P78337 314 aaPredicted RBP14.74□□□□□ -0.05
VPS29-209ENST00000551655 ZFP36L1Q07352 338 aaKnown RBP14.74□□□□□ -0.05
VPS29-209ENST00000551655 C16orf72Q14CZ0 275 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 SLC39A14Q15043 492 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 FAXCQ5TGI0 409 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 SYPL2Q5VXT5 272 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 SFTPA2Q8IWL1 248 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 CCDC150Q8NCX0 1101 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 SSC4DQ8WTU2 575 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 IRGQQ8WZA9 623 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 FEM1AQ9BSK4 669 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 TNKS2Q9H2K2 1166 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 GGT7Q9UJ14 662 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 VPS28Q9UK41 221 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 ITM2BQ9Y287 266 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 OR51B4Q9Y5P0 310 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 RNF215Q9Y6U7 377 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 ITPR3Q14573 2671 aa14.74□□□□□ -0.05
VPS29-209ENST00000551655 MED13Q9UHV7 2174 aa14.73□□□□□ -0.05
VPS29-209ENST00000551655 PRR19A6NJB7 356 aa14.73□□□□□ -0.05
VPS29-209ENST00000551655 K7EM74 188 aa14.73□□□□□ -0.05
VPS29-209ENST00000551655 NKX2-8O15522 239 aa14.73□□□□□ -0.05
VPS29-209ENST00000551655 SETSIPP0DME0 302 aa14.73□□□□□ -0.05
VPS29-209ENST00000551655 PRKAR1AP10644 381 aa14.73□□□□□ -0.05
VPS29-209ENST00000551655 VASPP50552 380 aaPredicted RBP14.73□□□□□ -0.05
VPS29-209ENST00000551655 PHF19Q5T6S3 580 aa14.73□□□□□ -0.05
VPS29-209ENST00000551655 FHL5Q5TD97 284 aa14.73□□□□□ -0.05
VPS29-209ENST00000551655 KIAA1161Q6NSJ0 714 aa14.73□□□□□ -0.05
VPS29-209ENST00000551655 CCNJLQ8IV13 435 aa14.73□□□□□ -0.05
VPS29-209ENST00000551655 SRRM1Q8IYB3 904 aaKnown RBP14.73□□□□□ -0.05
VPS29-209ENST00000551655 TMIEQ8NEW7 156 aa14.73□□□□□ -0.05
VPS29-209ENST00000551655 TFAP2BQ92481 460 aa14.73□□□□□ -0.05
VPS29-209ENST00000551655 RNF34Q969K3 372 aa14.73□□□□□ -0.05
VPS29-209ENST00000551655 PHF12Q96QT6 1004 aa14.73□□□□□ -0.05
VPS29-209ENST00000551655 PRMT1Q99873 361 aaKnown RBP14.73□□□□□ -0.05
VPS29-209ENST00000551655 HDAC8Q9BY41 377 aa14.73□□□□□ -0.05
VPS29-209ENST00000551655 SLC13A1Q9BZW2 595 aa14.73□□□□□ -0.05
VPS29-209ENST00000551655 SEMA6CQ9H3T2 930 aa14.73□□□□□ -0.05
VPS29-209ENST00000551655 CUEDC2Q9H467 287 aa14.73□□□□□ -0.05
VPS29-209ENST00000551655 DOLKQ9UPQ8 538 aa14.73□□□□□ -0.05
VPS29-209ENST00000551655 FRMD4BQ9Y2L6 1034 aa14.73□□□□□ -0.05
VPS29-209ENST00000551655 FADS3Q9Y5Q0 445 aa14.73□□□□□ -0.05
VPS29-209ENST00000551655 POLQO75417 2590 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 TCAF2A6NFQ2 919 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.72□□□□□ -0.05
VPS29-209ENST00000551655 STMND1H3BQB6 276 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 KLRC4O43908 158 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 LEFTY1O75610 366 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 APOEP02649 317 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 PDIA4P13667 645 aaKnown RBP14.72□□□□□ -0.05
VPS29-209ENST00000551655 ADRB3P13945 408 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 TNFRSF8P28908 595 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 IGFALSP35858 605 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 DCTP40126 519 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 NEK3P51956 506 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 THOP1P52888 689 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 CAPRIN2Q6IMN6 1127 aaKnown RBP14.72□□□□□ -0.05
VPS29-209ENST00000551655 LINGO4Q6UY18 593 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 SLITRK4Q8IW52 837 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 IL22RA1Q8N6P7 574 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 IQUBQ8NA54 791 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 ATP11CQ8NB49 1132 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 SLC35F5Q8WV83 523 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 FEM1CQ96JP0 617 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 PSMB7Q99436 277 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 ZSWIM1Q9BR11 485 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 ZNF768Q9H5H4 540 aaKnown RBP14.72□□□□□ -0.05
VPS29-209ENST00000551655 TMEM8AQ9HCN3 771 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 GPR34Q9UPC5 381 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 TP53TG5Q9Y2B4 290 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 WASF2Q9Y6W5 498 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 LRP4O75096 1905 aa14.72□□□□□ -0.05
VPS29-209ENST00000551655 PRNPP04156 253 aa14.71□□□□□ -0.05
VPS29-209ENST00000551655 ATP1A2P50993 1020 aa14.71□□□□□ -0.05
VPS29-209ENST00000551655 CCDC15Q0P6D6 951 aa14.71□□□□□ -0.05
VPS29-209ENST00000551655 SGCGQ13326 291 aa14.71□□□□□ -0.05
VPS29-209ENST00000551655 LACTB2Q53H82 288 aaPredicted RBP14.71□□□□□ -0.05
VPS29-209ENST00000551655 FBXL22Q6P050 247 aa14.71□□□□□ -0.05
VPS29-209ENST00000551655 SHC4Q6S5L8 630 aa14.71□□□□□ -0.05
VPS29-209ENST00000551655 PARS2Q7L3T8 475 aaKnown RBP14.71□□□□□ -0.05
VPS29-209ENST00000551655 TTC39CQ8N584 583 aa14.71□□□□□ -0.05
VPS29-209ENST00000551655 TMEM174Q8WUU8 243 aa14.71□□□□□ -0.05
VPS29-209ENST00000551655 FAM149B1Q96BN6 582 aa14.71□□□□□ -0.05
VPS29-209ENST00000551655 BTN2A3PQ96KV6 586 aa14.71□□□□□ -0.05
VPS29-209ENST00000551655 CMKLR1Q99788 373 aa14.71□□□□□ -0.05
VPS29-209ENST00000551655 C1QTNF2Q9BXJ5 285 aa14.71□□□□□ -0.05
VPS29-209ENST00000551655 IL36AQ9UHA7 158 aa14.71□□□□□ -0.05
VPS29-209ENST00000551655 HS3ST2Q9Y278 367 aa14.71□□□□□ -0.05
VPS29-209ENST00000551655 FARP1Q9Y4F1 1045 aaPredicted RBP14.71□□□□□ -0.05
VPS29-209ENST00000551655 PVALEFA0A1B0GWK0 134 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms