RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 APOA4P06727 396 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 SLC35E2BP0CK96 405 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 MED21Q13503 144 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 PAN2Q504Q3 1202 aaKnown RBP13.23□□□□□ -0.29
CACNB3-219ENST00000551544 SDCCAG8Q86SQ7 713 aaPredicted RBP13.23□□□□□ -0.29
CACNB3-219ENST00000551544 PGAP3Q96FM1 320 aaPredicted RBP13.23□□□□□ -0.29
CACNB3-219ENST00000551544 OMDQ99983 421 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 PAAF1Q9BRP4 392 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 KIFC1Q9BW19 673 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 SPATA16Q9BXB7 569 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 VCX3AQ9NNX9 186 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 MIOSQ9NXC5 875 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 RGSL1A5PLK6 1076 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 HHLA1C9JL84 531 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 H3BNX3 289 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 CAPN15O75808 1086 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 DLG1Q12959 904 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 SLC12A1Q13621 1099 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 HNRNPDQ14103 355 aaKnown RBP13.22□□□□□ -0.29
CACNB3-219ENST00000551544 CNPY1Q3B7I2 92 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 ACAD11Q709F0 780 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 BHLHA9Q7RTU4 235 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 KBTBD6Q86V97 674 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 ZSCAN18Q8TBC5 510 aaPredicted RBP13.22□□□□□ -0.29
CACNB3-219ENST00000551544 EZH1Q92800 747 aaPredicted RBP13.22□□□□□ -0.29
CACNB3-219ENST00000551544 SGF29Q96ES7 293 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 SMARCD1Q96GM5 515 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 CDRT15Q96T59 188 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 XPR1Q9UBH6 696 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 ANKRD6Q9Y2G4 727 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 TTC36A6NLP5 189 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 GRID2O43424 1007 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 CABYRO75952 493 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 DDHD2O94830 711 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 THP07101 528 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 BDNFP23560 247 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 ATXN3P54252 364 aaPredicted RBP13.22□□□□□ -0.29
CACNB3-219ENST00000551544 PRKAA1Q13131 559 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 CYLC2Q14093 348 aaPredicted RBP13.22□□□□□ -0.29
CACNB3-219ENST00000551544 MMEL1Q495T6 779 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 ESRP1Q6NXG1 681 aaKnown RBP13.22□□□□□ -0.29
CACNB3-219ENST00000551544 PKN3Q6P5Z2 889 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 DCLRE1AQ6PJP8 1040 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 LINC00523Q86TU6 105 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 SPNS2Q8IVW8 549 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 CEP97Q8IW35 865 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 DSELQ8IZU8 1212 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 CENPLQ8N0S6 344 aaPredicted RBP13.22□□□□□ -0.29
CACNB3-219ENST00000551544 RNF148Q8N7C7 305 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 KYQ8NBH2 561 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 MYLPFQ96A32 169 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 NXNL1Q96CM4 212 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 RCN3Q96D15 328 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 TBL1YQ9BQ87 522 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 CENPKQ9BS16 269 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 FICDQ9BVA6 458 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 ATXN3LQ9H3M9 355 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 SLC2A6Q9UGQ3 507 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 ACOT9Q9Y305 439 aa13.22□□□□□ -0.29
CACNB3-219ENST00000551544 DLX3O60479 287 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 ENO3P13929 434 aaPredicted RBP13.21□□□□□ -0.29
CACNB3-219ENST00000551544 UQCRBP14927 111 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 VCLP18206 1134 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 HADHAP40939 763 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 NUMBP49757 651 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 PKNOX1P55347 436 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 SH3BGRP55822 239 aaPredicted RBP13.21□□□□□ -0.29
CACNB3-219ENST00000551544 PCID2Q5JVF3 399 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 LRRC8EQ6NSJ5 796 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 TMEM86AQ8N2M4 240 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 ATPAF2Q8N5M1 289 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 RDH11Q8TC12 318 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 USP13Q92995 863 aaPredicted RBP13.21□□□□□ -0.29
CACNB3-219ENST00000551544 HAPLN3Q96S86 360 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 SLC38A7Q9NVC3 462 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 ZDHHC7Q9NXF8 308 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 NSMCE4AQ9NXX6 385 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 RRN3Q9NYV6 651 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 FLRT1Q9NZU1 646 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 CDH9Q9ULB4 789 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 CDYLQ9Y232 598 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 INPP5FQ9Y2H2 1132 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 TMEM233B4DJY2 109 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 PMPCBO75439 489 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 PIM1P11309 404 aaPredicted RBP13.21□□□□□ -0.29
CACNB3-219ENST00000551544 SCNN1GP51170 649 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 LIN52Q52LA3 116 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 RASIP1Q5U651 963 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 PM20D1Q6GTS8 502 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 C16orf89Q6UX73 402 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 MFSD6LQ8IWD5 586 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 DQX1Q8TE96 717 aaKnown RBP13.21□□□□□ -0.29
CACNB3-219ENST00000551544 STYXQ8WUJ0 223 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 ZNF419Q96HQ0 510 aaPredicted RBP13.21□□□□□ -0.29
CACNB3-219ENST00000551544 CLEC11AQ9Y240 323 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 SLC45A1Q9Y2W3 748 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 AAR2Q9Y312 384 aaKnown RBP13.21□□□□□ -0.29
CACNB3-219ENST00000551544 FIS1Q9Y3D6 152 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 PTCH2Q9Y6C5 1203 aa13.21□□□□□ -0.29
CACNB3-219ENST00000551544 FAM95CA0A1B0GW59 222 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms