RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 IL17RBQ9NRM6 502 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 DDX56Q9NY93 547 aaKnown RBP5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 UBA2Q9UBT2 640 aaPredicted RBP5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 KLQ9UEF7 1012 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 ATP11BQ9Y2G3 1177 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 VWA7Q9Y334 891 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 TESMINQ9Y4I5 508 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 PCDHGA8Q9Y5G5 932 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 CSADQ9Y600 493 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 MAU2Q9Y6X3 613 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 MROH5Q6ZUA9 1318 aa5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 AFDNP55196 1824 aaKnown RBP5.39□□□□□ -1.55
LSM3P2-201ENST00000551246 LAMB1P07942 1786 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 ARHGEF37A1IGU5 675 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 DYTNA2CJ06 578 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 ISPDA4D126 451 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 WDR91A4D1P6 747 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 ARHGAP42A6NI28 874 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 OR5K4A6NMS3 321 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 ZNF839A8K0R7 811 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 EVPLLA8MZ36 301 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 TCP10L2B9ZVM9 353 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 POC1B-GALNT4F8VUJ3 575 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 SMIM22K7EJ46 135 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 AP3B1O00203 1094 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 PSMD11O00231 422 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 XPO1O14980 1071 aaKnown RBP5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 SPOPO43791 374 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 GRIN3BO60391 1043 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 KCNJ13O60928 360 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 TMCC2O75069 709 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 BPGMP07738 259 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 DLATP10515 647 aaKnown RBP5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 COX4I1P13073 169 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 SLC5A1P13866 664 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 PTPN1P18031 435 aaKnown RBP5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 CCNA2P20248 432 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 IMPDH1P20839 514 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 GLDCP23378 1020 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 GLRA2P23416 452 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 BDNFP23560 247 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 IL4RP24394 825 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 NR2F2P24468 414 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 CCNCP24863 283 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 ACVR2AP27037 513 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 CASP3P42574 277 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 NR4A2P43354 598 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 HLCSP50747 726 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 MLLT6P55198 1093 aaPredicted RBP5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 CDH15P55291 814 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 ECT2LQ008S8 904 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 MS4A2Q01362 244 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 RPL6Q02878 288 aaKnown RBP5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 MAPRE1Q15691 268 aaKnown RBP5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 ARHGAP44Q17R89 818 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 KNOP1Q1ED39 458 aaKnown RBP5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 YIF1BQ5BJH7 314 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 PPP6R3Q5H9R7 873 aaPredicted RBP5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 SLC10A5Q5PT55 438 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 SNAP47Q5SQN1 464 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 ZNF618Q5T7W0 954 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 ZBTB37Q5TC79 503 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 PLA2G4FQ68DD2 849 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 CYP4F22Q6NT55 531 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 FAM122CQ6P4D5 195 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 TUBA3EQ6PEY2 450 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 TIFABQ6ZNK6 161 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 CDHR3Q6ZTQ4 885 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 KIAA0408Q6ZU52 694 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 TMEM26Q6ZUK4 368 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 CYP4V2Q6ZWL3 525 aaPredicted RBP5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 UBE2Q1Q7Z7E8 422 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 NEK8Q86SG6 692 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 RALGPS2Q86X27 583 aaPredicted RBP5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 ARMC8Q8IUR7 673 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 LIX1LQ8IVB5 337 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 ARID3BQ8IVW6 561 aaPredicted RBP5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 CCDC60Q8IWA6 550 aaPredicted RBP5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 ZC3H7AQ8IWR0 971 aaKnown RBP5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 KATNAL2Q8IYT4 538 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 DEFB107AQ8IZN7 70 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 LINC00469Q8N7U9 141 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 UBR7Q8N806 425 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 Q8N9G6 341 aaPredicted RBP5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 SNX31Q8N9S9 440 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 PNPT1Q8TCS8 783 aaKnown RBP5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 ZNF296Q8WUU4 475 aaPredicted RBP5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 S100ZQ8WXG8 99 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 ATG4AQ8WYN0 398 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 NKD2Q969F2 451 aaPredicted RBP5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 ISL2Q96A47 359 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 E2F7Q96AV8 911 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 SLCO4A1Q96BD0 722 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 CMTM5Q96DZ9 223 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 TOE1Q96GM8 510 aaKnown RBP5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 REXO5Q96IC2 774 aaKnown RBP5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 RNF170Q96K19 258 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 UBXN10Q96LJ8 280 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 ASB2Q96Q27 587 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 PAFAH2Q99487 392 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms