RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 ITGB7P26010 798 aa22.12■■□□□ 1.13
SMARCC2-210ENST00000550519 L1CAMP32004 1257 aa22.12■■□□□ 1.13
SMARCC2-210ENST00000550519 RPS21P63220 83 aaKnown RBP22.12■■□□□ 1.13
SMARCC2-210ENST00000550519 ARF5P84085 180 aa22.12■■□□□ 1.13
SMARCC2-210ENST00000550519 GNA12Q03113 381 aa22.12■■□□□ 1.13
SMARCC2-210ENST00000550519 CARD16Q5EG05 197 aa22.12■■□□□ 1.13
SMARCC2-210ENST00000550519 CDCP2Q5VXM1 449 aa22.12■■□□□ 1.13
SMARCC2-210ENST00000550519 KIAA1161Q6NSJ0 714 aa22.12■■□□□ 1.13
SMARCC2-210ENST00000550519 NOP9Q86U38 636 aaKnown RBP22.12■■□□□ 1.13
SMARCC2-210ENST00000550519 FAM131BQ86XD5 332 aa22.12■■□□□ 1.13
SMARCC2-210ENST00000550519 FEM1CQ96JP0 617 aa22.12■■□□□ 1.13
SMARCC2-210ENST00000550519 SLC17A9Q9BYT1 436 aa22.12■■□□□ 1.13
SMARCC2-210ENST00000550519 NLGN3Q9NZ94 848 aa22.12■■□□□ 1.13
SMARCC2-210ENST00000550519 RAI2Q9Y5P3 530 aa22.12■■□□□ 1.13
SMARCC2-210ENST00000550519 CXorf51AA0A1B0GTR3 108 aa22.11■■□□□ 1.13
SMARCC2-210ENST00000550519 GOLGA8SH3BPF8 625 aa22.11■■□□□ 1.13
SMARCC2-210ENST00000550519 SCAMP1O15126 338 aa22.11■■□□□ 1.13
SMARCC2-210ENST00000550519 AP1G1O43747 822 aa22.11■■□□□ 1.13
SMARCC2-210ENST00000550519 OPA1O60313 960 aa22.11■■□□□ 1.13
SMARCC2-210ENST00000550519 CD160O95971 181 aa22.11■■□□□ 1.13
SMARCC2-210ENST00000550519 ALPPL2P10696 532 aa22.11■■□□□ 1.13
SMARCC2-210ENST00000550519 UCHL3P15374 230 aa22.11■■□□□ 1.13
SMARCC2-210ENST00000550519 ACTN2P35609 894 aa22.11■■□□□ 1.13
SMARCC2-210ENST00000550519 CCNHP51946 323 aaPredicted RBP22.11■■□□□ 1.13
SMARCC2-210ENST00000550519 NOMO3P69849 1222 aa22.11■■□□□ 1.13
SMARCC2-210ENST00000550519 KYAT3Q6YP21 454 aaKnown RBP22.11■■□□□ 1.13
SMARCC2-210ENST00000550519 KDM7AQ6ZMT4 941 aa22.11■■□□□ 1.13
SMARCC2-210ENST00000550519 TMC6Q7Z403 805 aa22.11■■□□□ 1.13
SMARCC2-210ENST00000550519 FAM181AQ8N9Y4 354 aa22.11■■□□□ 1.13
SMARCC2-210ENST00000550519 MSANTD4Q8NCY6 345 aa22.11■■□□□ 1.13
SMARCC2-210ENST00000550519 APOLD1Q96LR9 279 aa22.11■■□□□ 1.13
SMARCC2-210ENST00000550519 LY6G6EA0A0G2JKS1 128 aa22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 POM121BA6NF01 834 aa22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 NEMP2A6NFY4 417 aa22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 RAD51BO15315 384 aa22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 PAK4O96013 591 aaPredicted RBP22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 MMEP08473 750 aa22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 ERCC5P28715 1186 aaPredicted RBP22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 DNA2P51530 1060 aa22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 HNRNPKP61978 463 aaKnown RBP eCLIP22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 MAPK8IP2Q13387 824 aaPredicted RBP22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 FZD2Q14332 565 aa22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 TBC1D25Q3MII6 688 aa22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 DPCR1Q3MIW9 517 aa22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 HSP90AA4PQ58FG1 418 aa22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 ZNF542PQ5EBM4 170 aa22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 PTAR1Q7Z6K3 402 aaPredicted RBP22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 PLPP6Q8IY26 295 aa22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 DRC7Q8IY82 874 aa22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 EPS8L1Q8TE68 723 aa22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 CPA5Q8WXQ8 436 aa22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 ISG20Q96AZ6 181 aaKnown RBP22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 DNAJC28Q9NX36 388 aa22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 FCF1Q9Y324 198 aaKnown RBP22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 PCDHB1Q9Y5F3 818 aa22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 ACTL7AQ9Y615 435 aa22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 U3KQA8 63 aa22.1■■□□□ 1.13
SMARCC2-210ENST00000550519 SPTY2D1-AS1A0A0U1RR47 76 aa22.09■■□□□ 1.13
SMARCC2-210ENST00000550519 K7ESM1 405 aa22.09■■□□□ 1.13
SMARCC2-210ENST00000550519 GP1BAP07359 652 aa22.09■■□□□ 1.13
SMARCC2-210ENST00000550519 NRG1Q02297 640 aaPredicted RBP22.09■■□□□ 1.13
SMARCC2-210ENST00000550519 MANEALQ5VSG8 457 aa22.09■■□□□ 1.13
SMARCC2-210ENST00000550519 NAA35Q5VZE5 725 aa22.09■■□□□ 1.13
SMARCC2-210ENST00000550519 PARS2Q7L3T8 475 aaKnown RBP22.09■■□□□ 1.13
SMARCC2-210ENST00000550519 ZSCAN30Q86W11 494 aa22.09■■□□□ 1.13
SMARCC2-210ENST00000550519 EMC1Q8N766 993 aa22.09■■□□□ 1.13
SMARCC2-210ENST00000550519 LENG8Q96PV6 779 aaPredicted RBP22.09■■□□□ 1.13
SMARCC2-210ENST00000550519 KLF6Q99612 283 aaPredicted RBP22.09■■□□□ 1.13
SMARCC2-210ENST00000550519 DUSP23Q9BVJ7 150 aa22.09■■□□□ 1.13
SMARCC2-210ENST00000550519 STK33Q9BYT3 514 aa22.09■■□□□ 1.13
SMARCC2-210ENST00000550519 CLSTN2Q9H4D0 955 aa22.09■■□□□ 1.13
SMARCC2-210ENST00000550519 USP29Q9HBJ7 922 aa22.09■■□□□ 1.13
SMARCC2-210ENST00000550519 HECAQ9UBI9 543 aaPredicted RBP22.09■■□□□ 1.13
SMARCC2-210ENST00000550519 DOCK4Q8N1I0 1966 aa22.08■■□□□ 1.13
SMARCC2-210ENST00000550519 TRPM6Q9BX84 2022 aa22.08■■□□□ 1.13
SMARCC2-210ENST00000550519 F8VZ95 297 aa22.08■■□□□ 1.13
SMARCC2-210ENST00000550519 TK2O00142 265 aa22.08■■□□□ 1.13
SMARCC2-210ENST00000550519 CSF2P04141 144 aa22.08■■□□□ 1.13
SMARCC2-210ENST00000550519 MYF5P13349 255 aa22.08■■□□□ 1.13
SMARCC2-210ENST00000550519 NME1P15531 152 aaKnown RBP22.08■■□□□ 1.13
SMARCC2-210ENST00000550519 ADRA1BP35368 520 aa22.08■■□□□ 1.13
SMARCC2-210ENST00000550519 ACVRL1P37023 503 aa22.08■■□□□ 1.13
SMARCC2-210ENST00000550519 ATP11AP98196 1134 aa22.08■■□□□ 1.13
SMARCC2-210ENST00000550519 RAB6CQ53S08 254 aa22.08■■□□□ 1.13
SMARCC2-210ENST00000550519 VOPP1Q96AW1 172 aa22.08■■□□□ 1.13
SMARCC2-210ENST00000550519 FCRL3Q96P31 734 aaPredicted RBP22.08■■□□□ 1.13
SMARCC2-210ENST00000550519 C1QTNF2Q9BXJ5 285 aa22.08■■□□□ 1.13
SMARCC2-210ENST00000550519 TM6SF2Q9BZW4 377 aa22.08■■□□□ 1.13
SMARCC2-210ENST00000550519 RAB6CQ9H0N0 254 aa22.08■■□□□ 1.13
SMARCC2-210ENST00000550519 RETREG1Q9H6L5 497 aa22.08■■□□□ 1.13
SMARCC2-210ENST00000550519 METTL5Q9NRN9 209 aaKnown RBP22.08■■□□□ 1.13
SMARCC2-210ENST00000550519 NDFIP2Q9NV92 336 aa22.08■■□□□ 1.13
SMARCC2-210ENST00000550519 OR12D3Q9UGF7 316 aa22.08■■□□□ 1.13
SMARCC2-210ENST00000550519 KALRNO60229 2985 aa22.07■■□□□ 1.12
SMARCC2-210ENST00000550519 ATXN7O15265 892 aaPredicted RBP22.07■■□□□ 1.12
SMARCC2-210ENST00000550519 NEBLO76041 1014 aa22.07■■□□□ 1.12
SMARCC2-210ENST00000550519 ETFBP38117 255 aa22.07■■□□□ 1.12
SMARCC2-210ENST00000550519 RABIFP47224 123 aa22.07■■□□□ 1.12
SMARCC2-210ENST00000550519 DUSP3P51452 185 aaPredicted RBP22.07■■□□□ 1.12
SMARCC2-210ENST00000550519 TLE3Q04726 772 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms