RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 C15orf59Q2T9L4 293 aaPredicted RBP11.09□□□□□ -0.63
VTI1BP3-201ENST00000550220 EFHC2Q5JST6 749 aa11.09□□□□□ -0.63
VTI1BP3-201ENST00000550220 PRAMEF14Q5SWL7 426 aa11.09□□□□□ -0.63
VTI1BP3-201ENST00000550220 MANEALQ5VSG8 457 aa11.09□□□□□ -0.63
VTI1BP3-201ENST00000550220 NLRP14Q86W24 1093 aa11.09□□□□□ -0.63
VTI1BP3-201ENST00000550220 PROSER1Q86XN7 944 aa11.09□□□□□ -0.63
VTI1BP3-201ENST00000550220 GATAD2AQ86YP4 633 aa11.09□□□□□ -0.63
VTI1BP3-201ENST00000550220 DRC7Q8IY82 874 aa11.09□□□□□ -0.63
VTI1BP3-201ENST00000550220 PDCD7Q8N8D1 485 aaKnown RBP11.09□□□□□ -0.63
VTI1BP3-201ENST00000550220 TMEM145Q8NBT3 493 aa11.09□□□□□ -0.63
VTI1BP3-201ENST00000550220 GRIN3AQ8TCU5 1115 aa11.09□□□□□ -0.63
VTI1BP3-201ENST00000550220 FAM172AQ8WUF8 416 aa11.09□□□□□ -0.63
VTI1BP3-201ENST00000550220 ARHGEF2Q92974 986 aaKnown RBP11.09□□□□□ -0.63
VTI1BP3-201ENST00000550220 PCDHB18PQ96TA0 734 aa11.09□□□□□ -0.63
VTI1BP3-201ENST00000550220 OSBPL1AQ9BXW6 950 aa11.09□□□□□ -0.63
VTI1BP3-201ENST00000550220 TNKS2Q9H2K2 1166 aa11.09□□□□□ -0.63
VTI1BP3-201ENST00000550220 CATSPERBQ9H7T0 1116 aa11.09□□□□□ -0.63
VTI1BP3-201ENST00000550220 TMPRSS4Q9NRS4 437 aa11.09□□□□□ -0.63
VTI1BP3-201ENST00000550220 SEPT11Q9NVA2 429 aaKnown RBP11.09□□□□□ -0.63
VTI1BP3-201ENST00000550220 KLHL11Q9NVR0 708 aa11.09□□□□□ -0.63
VTI1BP3-201ENST00000550220 NEMP2A6NFY4 417 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 EIF3CLB5ME19 914 aaKnown RBP11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 KDELR3O43731 214 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 ZNF821O75541 412 aaPredicted RBP11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 RFPL3O75679 317 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 GSRP00390 522 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 CAPNS1P04632 268 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 THEGLP0DJG4 465 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 ADRB3P13945 408 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 CKMT2P17540 419 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 GLDCP23378 1020 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 YBEYP58557 167 aaPredicted RBP11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 E2F1Q01094 437 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 SGCGQ13326 291 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 ZNF284Q2VY69 593 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 FILIP1LQ4L180 1135 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 INO80DQ53TQ3 878 aaPredicted RBP11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 ARTNQ5T4W7 220 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 SFMBT2Q5VUG0 894 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 ACAD10Q6JQN1 1059 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 DNAJC24Q6P3W2 148 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 DCUN1D2Q6PH85 259 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 WDR59Q6PJI9 974 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 SPATS2Q86XZ4 545 aaKnown RBP11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 CACTIN-AS1Q8N1I8 211 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 EID2Q8N6I1 236 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 CHST14Q8NCH0 376 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 OR2AP1Q8NGE2 309 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 JOSD2Q8TAC2 188 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 ASB12Q8WXK4 309 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 ARRDC3Q96B67 414 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 EIF3CQ99613 913 aaKnown RBP11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 EPAS1Q99814 870 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 BPIFA3Q9BQP9 254 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 CNPY3Q9BT09 278 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 SLC17A9Q9BYT1 436 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 EVA1BQ9NVM1 165 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 DNAI1Q9UI46 699 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 WASF2Q9Y6W5 498 aa11.08□□□□□ -0.64
VTI1BP3-201ENST00000550220 FGF10O15520 208 aaPredicted RBP11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 BUB1O43683 1085 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 ALPPL2P10696 532 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 JUPP14923 745 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 TNFAIP3P21580 790 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 EPHB2P29323 1055 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 SUOXP51687 545 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 CCNHP51946 323 aaPredicted RBP11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 TYRO3Q06418 890 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 BNIP3Q12983 259 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 ZNF211Q13398 564 aaPredicted RBP11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 NCAPHQ15003 741 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 MYLK3Q32MK0 819 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 PARP15Q460N3 678 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 TMEM259Q4ZIN3 620 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 CCDC157Q569K6 752 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 ZNF805Q5CZA5 627 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 SCYL2Q6P3W7 929 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 MON1BQ7L1V2 547 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 ABI3BPQ7Z7G0 1075 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 PHLDB2Q86SQ0 1253 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 ZNF354CQ86Y25 554 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 RYBPQ8N488 228 aaPredicted RBP11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 RTL3Q8N8U3 475 aaKnown RBP11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 TSC1Q92574 1164 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 NCAPGQ9BPX3 1015 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 PARVAQ9NVD7 372 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 FCF1Q9Y324 198 aaKnown RBP11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 FADS3Q9Y5Q0 445 aa11.07□□□□□ -0.64
VTI1BP3-201ENST00000550220 FAM170AA1A519 330 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 TRABD2BA6NFA1 517 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 C16orf96A6NNT2 1141 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 A6NNZ2 444 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 WASH4PA8MWX3 477 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 NEMP1O14524 444 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 ACVRL1P37023 503 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 RABIFP47224 123 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 ZNF135P52742 658 aaPredicted RBP11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 HNRNPKP61978 463 aaKnown RBP eCLIP11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 GRM3Q14832 879 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 DHRS13Q6UX07 377 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms