RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 PREBQ9HCU5 417 aa17.55■□□□□ 0.4
CHMP1A-208ENST00000550102 ACTL7AQ9Y615 435 aa17.55■□□□□ 0.4
CHMP1A-208ENST00000550102 SLCO1B1Q9Y6L6 691 aa17.55■□□□□ 0.4
CHMP1A-208ENST00000550102 TRPM6Q9BX84 2022 aa17.55■□□□□ 0.4
CHMP1A-208ENST00000550102 TBC1D3DA0A087WVF3 549 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 TBC1D3IA0A087WXS9 549 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 TBC1D3EA0A087X179 549 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 TBC1D3KA0A087X1G2 549 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 A0A1W2PPC4 97 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 TBC1D3FA6NER0 549 aaPredicted RBP17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 C10orf142B7Z368 130 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 TBC1D3LB9A6J9 549 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 H3BRJ5 948 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 MYO1FO00160 1098 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 LATO43561 262 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 AKR1B10O60218 316 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 LEFTY1O75610 366 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 TMCC1O94876 653 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 CER1O95813 267 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 GSRP00390 522 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 TBC1D3HP0C7X1 549 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 ITGB7P26010 798 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 NDST2P52849 883 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 PPP2CBP62714 309 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 PPP2CAP67775 309 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 DPYSL2Q16555 572 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 SMTNL2Q2TAL5 461 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 ARSIQ5FYB1 569 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 PIP5KL1Q5T9C9 394 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 TBC1D3GQ6DHY5 549 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 TBC1D3CQ6IPX1 549 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 IL27RAQ6UWB1 636 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 LEKR1Q6ZMV7 388 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 ADAT2Q7Z6V5 191 aaKnown RBP17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 PLPP6Q8IY26 295 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 TBC1D3Q8IZP1 549 aaPredicted RBP17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 OR2AP1Q8NGE2 309 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 OR2I1PQ8NGU4 316 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 TEKT4Q8WW24 435 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 BTBD6Q96KE9 485 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 GDAP1L1Q96MZ0 367 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 ORAI3Q9BRQ5 295 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 ZDHHC6Q9H6R6 413 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 LRRC19Q9H756 370 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 ZWILCHQ9H900 591 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 DNAAF2Q9NVR5 837 aaKnown RBP17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 CTTNBP2NLQ9P2B4 639 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 UVRAGQ9P2Y5 699 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 WASF2Q9Y6W5 498 aa17.54■□□□□ 0.4
CHMP1A-208ENST00000550102 A0A1B0GVT2 93 aa17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 MED19A0JLT2 244 aaPredicted RBP17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 TCF4P15884 667 aa17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 IL1R2P27930 398 aa17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 NUDT1P36639 197 aa17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 ARL4AP40617 200 aa17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 HCAR3P49019 387 aa17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 CSNK1EP49674 416 aaKnown RBP17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 ADKP55263 362 aaKnown RBP17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 SNRPD1P62314 119 aaKnown RBP17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 RACK1P63244 317 aaKnown RBP17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 DPYSQ14117 519 aa17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 ASTE1Q2TB18 679 aaPredicted RBP17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 BOLA3Q53S33 107 aa17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 ERN2Q76MJ5 926 aaKnown RBP17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 TRIM69Q86WT6 500 aa17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 RYBPQ8N488 228 aaPredicted RBP17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 HSPH1Q92598 858 aa17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 ARRDC3Q96B67 414 aa17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 CELF6Q96J87 481 aaKnown RBP17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 SLC6A18Q96N87 628 aa17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 HDAC8Q9BY41 377 aa17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 KLC2Q9H0B6 622 aa17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 LCMT1Q9UIC8 334 aa17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 CABIN1Q9Y6J0 2220 aa17.53■□□□□ 0.4
CHMP1A-208ENST00000550102 ARHGAP42A6NI28 874 aa17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 AKR1B15C9JRZ8 316 aaPredicted RBP17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 KRIT1O00522 736 aa17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 IGSF6O95976 241 aa17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 H2AFZP0C0S5 128 aa17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 ERCC2P18074 760 aa17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 CSRP1P21291 193 aaKnown RBP17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 SSR1P43307 286 aaKnown RBP17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 NOVA1P51513 510 aaKnown RBP17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 NEK3P51956 506 aa17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 TAS2R38P59533 333 aa17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 RHOAP61586 193 aa17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 SLC25A11Q02978 314 aaKnown RBP17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 TBX2Q13207 712 aaPredicted RBP17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 INO80DQ53TQ3 878 aaPredicted RBP17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 KCNT1Q5JUK3 1230 aa17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 PSAPL1Q6NUJ1 521 aa17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 LAYNQ6UX15 382 aa17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 H2AFVQ71UI9 128 aa17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 OR6K2Q8NGY2 324 aa17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 LRIG1Q96JA1 1093 aa17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 CCDC42Q96M95 316 aa17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 OSBPL1AQ9BXW6 950 aa17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 PACSIN1Q9BY11 444 aa17.52■□□□□ 0.4
CHMP1A-208ENST00000550102 AASDHPPTQ9NRN7 309 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms