RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 IQCHQ86VS3 1027 aa14.37□□□□□ -0.11
PTCH1-217ENST00000548420 DTX1Q86Y01 620 aa14.37□□□□□ -0.11
PTCH1-217ENST00000548420 CPXM2Q8N436 756 aa14.37□□□□□ -0.11
PTCH1-217ENST00000548420 ZSCAN1Q8NBB4 408 aa14.37□□□□□ -0.11
PTCH1-217ENST00000548420 ANKRD20A12PQ8NF67 263 aa14.37□□□□□ -0.11
PTCH1-217ENST00000548420 CPXM1Q96SM3 734 aa14.37□□□□□ -0.11
PTCH1-217ENST00000548420 ST7Q9NRC1 585 aa14.37□□□□□ -0.11
PTCH1-217ENST00000548420 SFMBT1Q9UHJ3 866 aa14.37□□□□□ -0.11
PTCH1-217ENST00000548420 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.36□□□□□ -0.11
PTCH1-217ENST00000548420 RNASEH2AO75792 299 aaKnown RBP14.36□□□□□ -0.11
PTCH1-217ENST00000548420 LATS1O95835 1130 aa14.36□□□□□ -0.11
PTCH1-217ENST00000548420 HLA-FP30511 346 aa14.36□□□□□ -0.11
PTCH1-217ENST00000548420 KRT9P35527 623 aa14.36□□□□□ -0.11
PTCH1-217ENST00000548420 ADPRHP54922 357 aa14.36□□□□□ -0.11
PTCH1-217ENST00000548420 ARID5AQ03989 594 aa14.36□□□□□ -0.11
PTCH1-217ENST00000548420 ZNF177Q13360 481 aaPredicted RBP14.36□□□□□ -0.11
PTCH1-217ENST00000548420 NNTQ13423 1086 aa14.36□□□□□ -0.11
PTCH1-217ENST00000548420 EIF4EBP2Q13542 120 aaPredicted RBP14.36□□□□□ -0.11
PTCH1-217ENST00000548420 SYCP1Q15431 976 aa14.36□□□□□ -0.11
PTCH1-217ENST00000548420 AADATQ8N5Z0 425 aa14.36□□□□□ -0.11
PTCH1-217ENST00000548420 GOLGA1Q92805 767 aa14.36□□□□□ -0.11
PTCH1-217ENST00000548420 AZIN2Q96A70 460 aa14.36□□□□□ -0.11
PTCH1-217ENST00000548420 MYO19Q96H55 970 aa14.36□□□□□ -0.11
PTCH1-217ENST00000548420 PPP1R13BQ96KQ4 1090 aa14.36□□□□□ -0.11
PTCH1-217ENST00000548420 FAM207AQ9NSI2 230 aaPredicted RBP14.36□□□□□ -0.11
PTCH1-217ENST00000548420 KLHL11Q9NVR0 708 aa14.36□□□□□ -0.11
PTCH1-217ENST00000548420 ASNSD1Q9NWL6 643 aa14.36□□□□□ -0.11
PTCH1-217ENST00000548420 SYCE3A1L190 88 aa14.35□□□□□ -0.11
PTCH1-217ENST00000548420 TCEA3O75764 348 aa14.35□□□□□ -0.11
PTCH1-217ENST00000548420 GLI1P08151 1106 aa14.35□□□□□ -0.11
PTCH1-217ENST00000548420 HMBSP08397 361 aa14.35□□□□□ -0.11
PTCH1-217ENST00000548420 GABRB2P47870 512 aa14.35□□□□□ -0.11
PTCH1-217ENST00000548420 POLR2FP61218 127 aaKnown RBP14.35□□□□□ -0.11
PTCH1-217ENST00000548420 YWHAZP63104 245 aaKnown RBP14.35□□□□□ -0.11
PTCH1-217ENST00000548420 UBXN1Q04323 297 aa14.35□□□□□ -0.11
PTCH1-217ENST00000548420 E2F5Q15329 346 aa14.35□□□□□ -0.11
PTCH1-217ENST00000548420 CST6Q15828 149 aa14.35□□□□□ -0.11
PTCH1-217ENST00000548420 POM121L1PQ3SYA9 428 aa14.35□□□□□ -0.11
PTCH1-217ENST00000548420 SYPL2Q5VXT5 272 aa14.35□□□□□ -0.11
PTCH1-217ENST00000548420 NOP9Q86U38 636 aaKnown RBP14.35□□□□□ -0.11
PTCH1-217ENST00000548420 DENND1CQ8IV53 801 aa14.35□□□□□ -0.11
PTCH1-217ENST00000548420 FBXO39Q8N4B4 442 aa14.35□□□□□ -0.11
PTCH1-217ENST00000548420 C9orf43Q8TAL5 461 aaPredicted RBP14.35□□□□□ -0.11
PTCH1-217ENST00000548420 EPS8L1Q8TE68 723 aa14.35□□□□□ -0.11
PTCH1-217ENST00000548420 SLC39A13Q96H72 371 aa14.35□□□□□ -0.11
PTCH1-217ENST00000548420 TRIM62Q9BVG3 475 aa14.35□□□□□ -0.11
PTCH1-217ENST00000548420 USP29Q9HBJ7 922 aa14.35□□□□□ -0.11
PTCH1-217ENST00000548420 RTN4Q9NQC3 1192 aaKnown RBP14.35□□□□□ -0.11
PTCH1-217ENST00000548420 CUEDC1Q9NWM3 386 aaPredicted RBP14.35□□□□□ -0.11
PTCH1-217ENST00000548420 SCML1Q9UN30 329 aa14.35□□□□□ -0.11
PTCH1-217ENST00000548420 PLA2G4CQ9UP65 541 aa14.35□□□□□ -0.11
PTCH1-217ENST00000548420 NAALADL1Q9UQQ1 740 aa14.35□□□□□ -0.11
PTCH1-217ENST00000548420 SHANK1Q9Y566 2161 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 EME2A4GXA9 379 aaPredicted RBP14.34□□□□□ -0.11
PTCH1-217ENST00000548420 SCAMP1O15126 338 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 NVLO15381 856 aaKnown RBP14.34□□□□□ -0.11
PTCH1-217ENST00000548420 TEX33O43247 280 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 MSI1O43347 362 aaKnown RBP14.34□□□□□ -0.11
PTCH1-217ENST00000548420 SIN3BO75182 1162 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 IGLV3-25P01717 112 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 MAT2AP31153 395 aaKnown RBP14.34□□□□□ -0.11
PTCH1-217ENST00000548420 SOX5P35711 763 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 OVGP1Q12889 678 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 TAF5Q15542 800 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 SKOR2Q2VWA4 1001 aaPredicted RBP14.34□□□□□ -0.11
PTCH1-217ENST00000548420 PTPN20Q4JDL3 420 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 ADGRF1Q5T601 910 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 CHST9Q7L1S5 443 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 KIAA0907Q7Z7F0 614 aaPredicted RBP14.34□□□□□ -0.11
PTCH1-217ENST00000548420 ZNF677Q86XU0 584 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 PASD1Q8IV76 773 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 UNC45BQ8IWX7 931 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 TMEM35BQ8NCS4 154 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 C1orf131Q8NDD1 294 aaKnown RBP14.34□□□□□ -0.11
PTCH1-217ENST00000548420 ZNF397Q8NF99 534 aaPredicted RBP14.34□□□□□ -0.11
PTCH1-217ENST00000548420 OR14C36Q8NHC7 312 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 DQX1Q8TE96 717 aaKnown RBP14.34□□□□□ -0.11
PTCH1-217ENST00000548420 NOX5Q96PH1 765 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 SLC2A13Q96QE2 648 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 IRX2Q9BZI1 471 aaPredicted RBP14.34□□□□□ -0.11
PTCH1-217ENST00000548420 POPDC2Q9HBU9 364 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 DONSONQ9NYP3 566 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 FOXJ2Q9P0K8 574 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 NOCTQ9UK39 431 aaKnown RBP14.34□□□□□ -0.11
PTCH1-217ENST00000548420 FZD4Q9ULV1 537 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 TLR6Q9Y2C9 796 aa14.34□□□□□ -0.11
PTCH1-217ENST00000548420 PRAMEF33A0A0G2JMD5 474 aa14.33□□□□□ -0.12
PTCH1-217ENST00000548420 PRAMEF10O60809 474 aa14.33□□□□□ -0.12
PTCH1-217ENST00000548420 LSM8O95777 96 aaKnown RBP14.33□□□□□ -0.12
PTCH1-217ENST00000548420 ERBB2P04626 1255 aa14.33□□□□□ -0.12
PTCH1-217ENST00000548420 CHRNB2P17787 502 aa14.33□□□□□ -0.12
PTCH1-217ENST00000548420 SNX16P57768 344 aa14.33□□□□□ -0.12
PTCH1-217ENST00000548420 SFSWAPQ12872 951 aaKnown RBP14.33□□□□□ -0.12
PTCH1-217ENST00000548420 ZNF542PQ5EBM4 170 aa14.33□□□□□ -0.12
PTCH1-217ENST00000548420 EFHC1Q5JVL4 640 aa14.33□□□□□ -0.12
PTCH1-217ENST00000548420 OLFML1Q6UWY5 402 aa14.33□□□□□ -0.12
PTCH1-217ENST00000548420 RAB11FIP2Q7L804 512 aa14.33□□□□□ -0.12
PTCH1-217ENST00000548420 SLC26A9Q7LBE3 791 aa14.33□□□□□ -0.12
PTCH1-217ENST00000548420 ZDHHC17Q8IUH5 632 aa14.33□□□□□ -0.12
PTCH1-217ENST00000548420 MMAAQ8IVH4 418 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms