RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 KDM3AQ9Y4C1 1321 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 ZCCHC6Q5VYS8 1495 aaKnown RBP4.52□□□□□ -1.69
SCAF11-210ENST00000547654 GOLGA6L10A0A0M3HER8 536 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 SMIM35A0A1B0GVV1 85 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 TCRBV5S1A1TA0A578 114 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 C16orf96A6NNT2 1141 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 A8MV72 311 aaPredicted RBP4.52□□□□□ -1.69
SCAF11-210ENST00000547654 MYO1GB0I1T2 1018 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 SH2B2O14492 632 aaPredicted RBP4.52□□□□□ -1.69
SCAF11-210ENST00000547654 CTIFO43310 598 aaKnown RBP4.52□□□□□ -1.69
SCAF11-210ENST00000547654 ATP6V1B1P15313 513 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 CHN1P15882 459 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 EEF1DP29692 281 aaKnown RBP4.52□□□□□ -1.69
SCAF11-210ENST00000547654 CYP2C18P33260 490 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 GRK5P34947 590 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 HTR7P34969 479 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 CPA2P48052 419 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 RCAN1P53805 252 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 EEFSECP57772 596 aaKnown RBP4.52□□□□□ -1.69
SCAF11-210ENST00000547654 TIAL1Q01085 375 aaKnown RBP eCLIP4.52□□□□□ -1.69
SCAF11-210ENST00000547654 FHL3Q13643 280 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 ACOX1Q15067 660 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 MED22Q15528 200 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 ASIC2Q16515 512 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 AAK1Q2M2I8 961 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 RNASE12Q5GAN4 147 aaKnown RBP4.52□□□□□ -1.69
SCAF11-210ENST00000547654 ZNF766Q5HY98 468 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 RAB11FIP4Q86YS3 637 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 P3H2Q8IVL5 708 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 SAMD14Q8IZD0 417 aaPredicted RBP4.52□□□□□ -1.69
SCAF11-210ENST00000547654 C11orf44Q8N8P7 122 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 PNLDC1Q8NA58 520 aaKnown RBP4.52□□□□□ -1.69
SCAF11-210ENST00000547654 AVL9Q8NBF6 648 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 PRSS3P2Q8NHM4 247 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 RUFY2Q8WXA3 655 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 OVCA2Q8WZ82 227 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 SMARCE1Q969G3 411 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 ARRDC3Q96B67 414 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 ZNF653Q96CK0 615 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 KLHL29Q96CT2 875 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 RSPRY1Q96DX4 576 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 HERC2P3Q9BVR0 1158 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 VN1R3Q9BXE9 311 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 KAT14Q9H8E8 782 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 ERVMER34-1Q9H9K5 563 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 DBNDD1Q9H9R9 158 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 SEMA4BQ9NPR2 832 aaPredicted RBP4.52□□□□□ -1.69
SCAF11-210ENST00000547654 ASIC5Q9NY37 505 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 MPP6Q9NZW5 540 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 CPSF2Q9P2I0 782 aaKnown RBP4.52□□□□□ -1.69
SCAF11-210ENST00000547654 MTRRQ9UBK8 725 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 RIMKLBQ9ULI2 386 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 PCDHA10Q9Y5I2 948 aa4.52□□□□□ -1.69
SCAF11-210ENST00000547654 BAZ1BQ9UIG0 1483 aaKnown RBP4.51□□□□□ -1.69
SCAF11-210ENST00000547654 LOC105369274A0A096LPK9 316 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 LOC102723532A0A0G2JNH3 316 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 TEX13CA0A0J9YWL9 993 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 A0A1W2PQ09 198 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 LIPT2A6NK58 231 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 AGPSO00116 658 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 UBE2CO00762 179 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 DHX16O60231 1041 aaKnown RBP4.51□□□□□ -1.69
SCAF11-210ENST00000547654 MTA2O94776 668 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 VNN1O95497 513 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 METTL18O95568 372 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 TMEM225BP0DP42 221 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 ACP5P13686 325 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 CDH2P19022 906 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-210ENST00000547654 ATP5DP30049 168 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 PBX1P40424 430 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 DGKQP52824 942 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 FAM3BP58499 235 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-210ENST00000547654 EIF4A1P60842 406 aaKnown RBP4.51□□□□□ -1.69
SCAF11-210ENST00000547654 PSG6Q00889 435 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 PPARDQ03181 441 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 AIMP1Q12904 312 aaKnown RBP4.51□□□□□ -1.69
SCAF11-210ENST00000547654 SEMA3BQ13214 749 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 PPP2R5CQ13362 524 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 ST3GAL2Q16842 350 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 ODF2Q5BJF6 829 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 SLC10A5Q5PT55 438 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 NCEH1Q6PIU2 408 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 SLFN11Q7Z7L1 901 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 THNSL1Q8IYQ7 743 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 CEP57L1Q8IYX8 460 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 OR4N4Q8N0Y3 316 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 OR8H3Q8N146 312 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 GALNT16Q8N428 558 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 POMGNT2Q8NAT1 580 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 GABPB2Q8TAK5 448 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-210ENST00000547654 ZNF398Q8TD17 642 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 OSCP1Q8WVF1 389 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 MASTLQ96GX5 879 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 KAZALD1Q96I82 304 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 RITA1Q96K30 269 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 C5orf34Q96MH7 638 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 APOL6Q9BWW8 343 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 TEX12Q9BXU0 123 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 EBF3Q9H4W6 596 aa4.51□□□□□ -1.69
SCAF11-210ENST00000547654 PDE11AQ9HCR9 933 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms