RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 LPGAT1Q92604 370 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.87□□□□□ -0.03
HOXC11-202ENST00000546378 DGKBQ9Y6T7 804 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 ASB14A6NK59 587 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 FAM159BA6NKW6 160 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 KPNA7A9QM74 516 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 H3BNX3 289 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 THRAP10827 490 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 SLC7A2P52569 658 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 TPI1P60174 286 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 CELF3Q5SZQ8 465 aaKnown RBP14.87□□□□□ -0.03
HOXC11-202ENST00000546378 KYAT3Q6YP21 454 aaKnown RBP14.87□□□□□ -0.03
HOXC11-202ENST00000546378 RDM1Q8NG50 284 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 POMKQ9H5K3 350 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 TUT1Q9H6E5 874 aaKnown RBP14.87□□□□□ -0.03
HOXC11-202ENST00000546378 PSMD13Q9UNM6 376 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 NFASCO94856 1347 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 NDC80O14777 642 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 MCF2P10911 925 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 MTHFD1P11586 935 aaKnown RBP14.86□□□□□ -0.03
HOXC11-202ENST00000546378 PRKCHP24723 683 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 MAPK11Q15759 364 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 PERM1Q5SV97 790 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 MAP3K21Q5TCX8 1036 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 NCBP2-AS2Q69YL0 99 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 ACTRT2Q8TDY3 377 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 RNF139Q8WU17 664 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 EIF2AQ9BY44 585 aaKnown RBP14.86□□□□□ -0.03
HOXC11-202ENST00000546378 NXF3Q9H4D5 531 aaKnown RBP14.86□□□□□ -0.03
HOXC11-202ENST00000546378 GPBP1L1Q9HC44 474 aaPredicted RBP14.86□□□□□ -0.03
HOXC11-202ENST00000546378 EXD2Q9NVH0 621 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 UTP6Q9NYH9 597 aaKnown RBP14.86□□□□□ -0.03
HOXC11-202ENST00000546378 NUP214P35658 2090 aaPredicted RBP14.86□□□□□ -0.03
HOXC11-202ENST00000546378 EVPLQ92817 2033 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 A0A0A0MRY4 1105 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 LRRC14BA6NHZ5 514 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 SCAMP3O14828 347 aaKnown RBP14.86□□□□□ -0.03
HOXC11-202ENST00000546378 CRCPO75575 148 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 BEST1O76090 585 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 BAIAP3O94812 1187 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 USP17L7P0C7H9 530 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 ALDH4A1P30038 563 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 NSUN2Q08J23 767 aaKnown RBP eCLIP14.86□□□□□ -0.03
HOXC11-202ENST00000546378 TUBB3Q13509 450 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 ZNF470Q6ECI4 717 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 CYP4V2Q6ZWL3 525 aaPredicted RBP14.86□□□□□ -0.03
HOXC11-202ENST00000546378 HERC6Q8IVU3 1022 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 FSTL5Q8N475 847 aaPredicted RBP14.86□□□□□ -0.03
HOXC11-202ENST00000546378 OR52K2Q8NGK3 314 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 NUDT8Q8WV74 236 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 SPATA13Q96N96 652 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 GPR20Q99678 358 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 SSU72Q9NP77 194 aaKnown RBP14.86□□□□□ -0.03
HOXC11-202ENST00000546378 RRN3Q9NYV6 651 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 A0A0J9YVX5 310 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 C1orf232A0A0U1RR37 186 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 OR51F1A6NGY5 319 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 ACKR2O00590 384 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 TMCC1O94876 653 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 TNFAIP8O95379 198 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 RPL14P50914 215 aaKnown RBP14.86□□□□□ -0.03
HOXC11-202ENST00000546378 PIGFQ07326 219 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 SEMA5AQ13591 1074 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 IER5Q5VY09 327 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 ARHGAP36Q6ZRI8 547 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 PLEKHH3Q7Z736 793 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 OR10Q1Q8NGQ4 319 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 MCRS1Q96EZ8 462 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 FBXL20Q96IG2 436 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 VPS50Q96JG6 964 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 NAA50Q9GZZ1 169 aaKnown RBP14.86□□□□□ -0.03
HOXC11-202ENST00000546378 SETD4Q9NVD3 440 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 AP4S1Q9Y587 144 aa14.86□□□□□ -0.03
HOXC11-202ENST00000546378 MAFBQ9Y5Q3 323 aaPredicted RBP14.86□□□□□ -0.03
HOXC11-202ENST00000546378 COL11A1P12107 1806 aaPredicted RBP14.86□□□□□ -0.03
HOXC11-202ENST00000546378 ABLIM1O14639 778 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 PRKCGP05129 697 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 TGFB3P10600 412 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 ERCC2P18074 760 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 ICAM3P32942 547 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 RGS2P41220 211 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 GSSP48637 474 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 RBP5P82980 135 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 PTPRCAPQ14761 206 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 FAM83EQ2M2I3 478 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 DNAJC14Q6Y2X3 702 aaPredicted RBP14.85□□□□□ -0.03
HOXC11-202ENST00000546378 PIGZQ86VD9 579 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 MAGEE2Q8TD90 523 aaPredicted RBP14.85□□□□□ -0.03
HOXC11-202ENST00000546378 GIPC3Q8TF64 312 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 SARS2Q9NP81 518 aaKnown RBP14.85□□□□□ -0.03
HOXC11-202ENST00000546378 C7orf72A4D263 438 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 PPP6CO00743 305 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 TRDMT1O14717 391 aaKnown RBP14.85□□□□□ -0.03
HOXC11-202ENST00000546378 INPP4BO15327 924 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 GGT5P36269 586 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 PSME3P61289 254 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 PHEXP78562 749 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 HPCAP84074 193 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 ECT2LQ008S8 904 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 TRAF2Q12933 501 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms