RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 CSF2RAP15509 400 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 HOXB4P17483 251 aaPredicted RBP7.17□□□□□ -1.26
SPPL3-209ENST00000545209 RPL17P18621 184 aaKnown RBP7.17□□□□□ -1.26
SPPL3-209ENST00000545209 ATF6P18850 670 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 NFKB1P19838 968 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 ALAS2P22557 587 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 PRKCHP24723 683 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 CNTFP26441 200 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 GCAP28676 217 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 ATP5C1P36542 298 aaKnown RBP7.17□□□□□ -1.26
SPPL3-209ENST00000545209 PPP3CCP48454 512 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 IFNAR2P48551 515 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 CCT5P48643 541 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 MAPKAPK2P49137 400 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 SLC11A2P49281 568 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 HARS2P49590 506 aaKnown RBP7.17□□□□□ -1.26
SPPL3-209ENST00000545209 SERPINB9P50453 376 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 SEC24CP53992 1094 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 SESN2P58004 480 aaPredicted RBP7.17□□□□□ -1.26
SPPL3-209ENST00000545209 DEFB103AP81534 67 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 ZBTB17Q13105 803 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 PLD1Q13393 1074 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 CCINQ13939 588 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 RAB33AQ14088 237 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 SPARCL1Q14515 664 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 EFTUD2Q15029 972 aaKnown RBP eCLIP7.17□□□□□ -1.26
SPPL3-209ENST00000545209 ELOA3BQ3SY89 546 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 KBTBD12Q3ZCT8 623 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 MS4A13Q5J8X5 152 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 HECTD3Q5T447 861 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 PIK3R6Q5UE93 754 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 TTC39BQ5VTQ0 682 aaPredicted RBP7.17□□□□□ -1.26
SPPL3-209ENST00000545209 AFMIDQ63HM1 303 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 STEAP4Q687X5 459 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 NAPEPLDQ6IQ20 393 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 ZNF449Q6P9G9 518 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 KLHDC10Q6PID8 442 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 UNC5AQ6ZN44 842 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 CHSY3Q70JA7 882 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 CYS1Q717R9 158 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 ZNF534Q76KX8 674 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 C14orf80Q86SX3 495 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 DDX53Q86TM3 631 aaKnown RBP7.17□□□□□ -1.26
SPPL3-209ENST00000545209 TREML1Q86YW5 311 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 ARHGAP12Q8IWW6 846 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 TP53INP2Q8IXH6 220 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 UMODL1-AS1Q8N2C9 162 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 PPM1NQ8N819 430 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 DNAAF3Q8N9W5 541 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 ELOA3Q8NG57 546 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 ZNF461Q8TAF7 563 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 ZNF473Q8WTR7 871 aaKnown RBP7.17□□□□□ -1.26
SPPL3-209ENST00000545209 DEPDC1BQ8WUY9 529 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 DCAKDQ8WVC6 231 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 ATXN2LQ8WWM7 1075 aaKnown RBP7.17□□□□□ -1.26
SPPL3-209ENST00000545209 BHMTQ93088 406 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 FATE1Q969F0 183 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 PLD4Q96BZ4 506 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 MTBPQ96DY7 904 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 TRMT2BQ96GJ1 504 aaKnown RBP7.17□□□□□ -1.26
SPPL3-209ENST00000545209 SIGLEC10Q96LC7 697 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 CCT8L2Q96SF2 557 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 DDX50Q9BQ39 737 aaKnown RBP7.17□□□□□ -1.26
SPPL3-209ENST00000545209 VN1R3Q9BXE9 311 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 SLC39A8Q9C0K1 460 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 RABEP2Q9H5N1 569 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 RETREG1Q9H6L5 497 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 CYP4F11Q9HBI6 524 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 C11orf16Q9NQ32 467 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 MRPL17Q9NRX2 175 aaKnown RBP7.17□□□□□ -1.26
SPPL3-209ENST00000545209 TMEM248Q9NWD8 314 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 TRPM5Q9NZQ8 1165 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 UXTQ9UBK9 157 aaPredicted RBP7.17□□□□□ -1.26
SPPL3-209ENST00000545209 PRKAG2Q9UGJ0 569 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 IPO11Q9UI26 975 aaKnown RBP7.17□□□□□ -1.26
SPPL3-209ENST00000545209 VANGL2Q9ULK5 521 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 SSX2IPQ9Y2D8 614 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 YIPF1Q9Y548 306 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 PCDHB12Q9Y5F1 795 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 NR2E3Q9Y5X4 410 aa7.17□□□□□ -1.26
SPPL3-209ENST00000545209 MRPL42Q9Y6G3 142 aaKnown RBP7.17□□□□□ -1.26
SPPL3-209ENST00000545209 IGLV3-10A0A075B6K4 115 aa7.16□□□□□ -1.26
SPPL3-209ENST00000545209 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.16□□□□□ -1.26
SPPL3-209ENST00000545209 MAGEB16A2A368 324 aa7.16□□□□□ -1.26
SPPL3-209ENST00000545209 TRIM43BA6NCK2 446 aa7.16□□□□□ -1.26
SPPL3-209ENST00000545209 FAM159BA6NKW6 160 aa7.16□□□□□ -1.26
SPPL3-209ENST00000545209 MAFKO60675 156 aa7.16□□□□□ -1.26
SPPL3-209ENST00000545209 RAMP2O60895 175 aa7.16□□□□□ -1.26
SPPL3-209ENST00000545209 ABLIM3O94929 683 aa7.16□□□□□ -1.26
SPPL3-209ENST00000545209 ZWINTO95229 277 aa7.16□□□□□ -1.26
SPPL3-209ENST00000545209 TBX18O95935 607 aa7.16□□□□□ -1.26
SPPL3-209ENST00000545209 SNRPAP09012 282 aaKnown RBP7.16□□□□□ -1.26
SPPL3-209ENST00000545209 HSPA8P11142 646 aaKnown RBP7.16□□□□□ -1.26
SPPL3-209ENST00000545209 KRT4P19013 534 aa7.16□□□□□ -1.26
SPPL3-209ENST00000545209 CA4P22748 312 aa7.16□□□□□ -1.26
SPPL3-209ENST00000545209 MGAT1P26572 445 aa7.16□□□□□ -1.26
SPPL3-209ENST00000545209 GRNP28799 593 aaKnown RBP7.16□□□□□ -1.26
SPPL3-209ENST00000545209 GRIA1P42261 906 aa7.16□□□□□ -1.26
SPPL3-209ENST00000545209 NPY2RP49146 381 aa7.16□□□□□ -1.26
SPPL3-209ENST00000545209 PAPOLAP51003 745 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms