RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 BAG3O95817 575 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 CTSHP09668 335 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 RPS2P15880 293 aaKnown RBP9.01□□□□□ -0.97
VPS13D-212ENST00000543766 RXRBP28702 533 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 TXKP42681 527 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 CCR10P46092 362 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 PCM1Q15154 2024 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 C2CD5Q86YS7 1000 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 WDR49Q8IV35 697 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 CYP4Z2PQ8N1L4 340 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 EIF1ADQ8N9N8 165 aaKnown RBP9.01□□□□□ -0.97
VPS13D-212ENST00000543766 CLHC1Q8NHS4 586 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 ING5Q8WYH8 240 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 EDC3Q96F86 508 aaKnown RBP9.01□□□□□ -0.97
VPS13D-212ENST00000543766 CDCA5Q96FF9 252 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 SPATA13Q96N96 652 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 P2RX7Q99572 595 aaKnown RBP9.01□□□□□ -0.97
VPS13D-212ENST00000543766 PCDH11XQ9BZA7 1347 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 PCDH11YQ9BZA8 1340 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 SNAP23O00161 211 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 ESRRBO95718 433 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 PTBP3O95758 552 aaKnown RBP9.01□□□□□ -0.97
VPS13D-212ENST00000543766 PLGP00747 810 aaPredicted RBP9.01□□□□□ -0.97
VPS13D-212ENST00000543766 ENTPD1P49961 510 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 SERPINH1P50454 418 aaKnown RBP9.01□□□□□ -0.97
VPS13D-212ENST00000543766 MAPK10P53779 464 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 GRIN2CQ14957 1233 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 SEC23BQ15437 767 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 ALG11Q2TAA5 492 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 LEXMQ3ZCV2 418 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 PAGE2BQ5JRK9 111 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 LIPNQ5VXI9 398 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 UNC13DQ70J99 1090 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 ASRGL1Q7L266 308 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 KBTBD7Q8WVZ9 684 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 PAGE5Q96GU1 130 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 CCDC43Q96MW1 224 aaKnown RBP9.01□□□□□ -0.97
VPS13D-212ENST00000543766 BBS4Q96RK4 519 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 CDHR5Q9HBB8 845 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 ABHD14A-ACY1A0A1B0GW23 586 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 METTL21EPA6NDL7 271 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 TERTO14746 1132 aaKnown RBP9□□□□□ -0.97
VPS13D-212ENST00000543766 GMDSO60547 372 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 H2AFYO75367 372 aaKnown RBP9□□□□□ -0.97
VPS13D-212ENST00000543766 TOP3BO95985 862 aaKnown RBP9□□□□□ -0.97
VPS13D-212ENST00000543766 OAS1P00973 400 aaKnown RBP9□□□□□ -0.97
VPS13D-212ENST00000543766 INHBAP08476 426 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 KRT3P12035 628 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 ACTR1AP61163 376 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 ERVK-9P63128 1117 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 HTRA4P83105 476 aaPredicted RBP9□□□□□ -0.97
VPS13D-212ENST00000543766 CYP27C1Q4G0S4 372 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 DCAF6Q58WW2 860 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 CELF2-AS1Q8N7Q2 184 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 MFSD2AQ8NA29 543 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 FANCBQ8NB91 859 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 ZSWIM2Q8NEG5 633 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 ST7LQ8TDW4 575 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 DACH2Q96NX9 599 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 CITED1Q99966 193 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 ABCB9Q9NP78 766 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 BCAP29Q9UHQ4 241 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 WASF2Q9Y6W5 498 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 SPEF2Q9C093 1822 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 hCG_1809904A0A1W2PP81 198 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 A0A1W2PPE2 198 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 A0A1W2PR64 198 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 CLRN2A0PK11 232 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 DBX1A6NMT0 343 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 PHF20L1A8MW92 1017 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 CCDC188H7C350 402 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 TOR1AO14656 332 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 AREL1O15033 823 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 IRAK2O43187 625 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 SMAD6O43541 496 aaKnown RBP9□□□□□ -0.97
VPS13D-212ENST00000543766 NOBOXO60393 691 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 RARAP10276 462 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 CALB2P22676 271 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 NCALDP61601 193 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 ITGADQ13349 1161 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 C5orf22Q49AR2 442 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 TMEM67Q5HYA8 995 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 FAM102BQ5T8I3 360 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 AGBL2Q5U5Z8 902 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 CATSPER3Q86XQ3 398 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 DENND6AQ8IWF6 608 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 CADM2Q8N3J6 435 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 FBXL6Q8N531 539 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 DPP10Q8N608 796 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 CHAC2Q8WUX2 184 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 ATXN2LQ8WWM7 1075 aaKnown RBP9□□□□□ -0.97
VPS13D-212ENST00000543766 CYTH2Q99418 400 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 SYTL2Q9HCH5 934 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 IL1RAPQ9NPH3 570 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 ARHGEF3Q9NR81 526 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 GUCA1BQ9UMX6 200 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 PALLDQ8WX93 1383 aa9□□□□□ -0.97
VPS13D-212ENST00000543766 MIF4GDA9UHW6 222 aaKnown RBP9□□□□□ -0.97
VPS13D-212ENST00000543766 ZBTB24O43167 697 aaPredicted RBP9□□□□□ -0.97
VPS13D-212ENST00000543766 FUCA1P04066 466 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms