RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 VWA5B1Q5TIE3 1220 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 MON1BQ7L1V2 547 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 TUBGCP5Q96RT8 1024 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 LGMNQ99538 433 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 TAS2R13Q9NYV9 303 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 UBAP1Q9NZ09 502 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 EGFL7Q9UHF1 273 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 NOCTQ9UK39 431 aaKnown RBP19.59■□□□□ 0.73
SUDS3-204ENST00000543473 AJAP1Q9UKB5 411 aaPredicted RBP19.59■□□□□ 0.73
SUDS3-204ENST00000543473 DSEQ9UL01 958 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 DOLKQ9UPQ8 538 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 B3GAT3O94766 335 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 RRM2P31350 389 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 CCNG1P51959 295 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 NCF4Q15080 339 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 PCID2Q5JVF3 399 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 TMEM134Q9H6X4 195 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 ACTR8Q9H981 624 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 SLC7A8Q9UHI5 535 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 IL12RB1P42701 662 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 OR1G1P47890 313 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 ARHGAP17Q68EM7 881 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 HERC6Q8IVU3 1022 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 LENG8Q96PV6 779 aaPredicted RBP19.59■□□□□ 0.73
SUDS3-204ENST00000543473 CLPBQ9H078 707 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 RMI1Q9H9A7 625 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 PRDM16Q9HAZ2 1276 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 ABI2Q9NYB9 513 aaPredicted RBP19.59■□□□□ 0.73
SUDS3-204ENST00000543473 CDH9Q9ULB4 789 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 LRRC42Q9Y546 428 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 SNCAIPQ9Y6H5 919 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 ASS1P00966 412 aaKnown RBP19.59■□□□□ 0.73
SUDS3-204ENST00000543473 RENBPP51606 427 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 C1DQ13901 141 aaKnown RBP19.59■□□□□ 0.73
SUDS3-204ENST00000543473 VEPH1Q14D04 833 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 ELMSAN1Q6PJG2 1045 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 ABHD8Q96I13 439 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 OSMRQ99650 979 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 POMPQ9Y244 141 aa19.59■□□□□ 0.73
SUDS3-204ENST00000543473 PRG3Q9Y2Y8 225 aaPredicted RBP19.59■□□□□ 0.73
SUDS3-204ENST00000543473 INSCQ1MX18 579 aa19.58■□□□□ 0.73
SUDS3-204ENST00000543473 PSMA8Q8TAA3 256 aa19.58■□□□□ 0.73
SUDS3-204ENST00000543473 ACTRT2Q8TDY3 377 aa19.58■□□□□ 0.73
SUDS3-204ENST00000543473 PHF21AQ96BD5 680 aa19.58■□□□□ 0.73
SUDS3-204ENST00000543473 ABHD16BQ9H3Z7 469 aa19.58■□□□□ 0.73
SUDS3-204ENST00000543473 ELOVL6Q9H5J4 265 aa19.58■□□□□ 0.73
SUDS3-204ENST00000543473 C3orf18Q9UK00 162 aa19.58■□□□□ 0.73
SUDS3-204ENST00000543473 CRYL1Q9Y2S2 319 aa19.58■□□□□ 0.73
SUDS3-204ENST00000543473 COPG1Q9Y678 874 aaKnown RBP19.58■□□□□ 0.73
SUDS3-204ENST00000543473 CACNA1FO60840 1977 aa19.58■□□□□ 0.73
SUDS3-204ENST00000543473 SPIDRQ14159 915 aa19.58■□□□□ 0.73
SUDS3-204ENST00000543473 PFKFB4Q16877 469 aa19.58■□□□□ 0.73
SUDS3-204ENST00000543473 HS6ST3Q8IZP7 471 aa19.58■□□□□ 0.73
SUDS3-204ENST00000543473 ELMOD1Q8N336 334 aa19.58■□□□□ 0.73
SUDS3-204ENST00000543473 NUAK2Q9H093 628 aa19.58■□□□□ 0.73
SUDS3-204ENST00000543473 FADS3Q9Y5Q0 445 aa19.58■□□□□ 0.73
SUDS3-204ENST00000543473 ATP6V1G1O75348 118 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 LTFP02788 710 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 C2P06681 752 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 CHRNB2P17787 502 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 MPSTP25325 297 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 CBX3Q13185 183 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 ZNF846Q147U1 533 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 SPESP1Q6UW49 350 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 REPS2Q8NFH8 660 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 SPPL2AQ8TCT8 520 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 S100ZQ8WXG8 99 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 SEPT5Q99719 369 aaPredicted RBP19.58■□□□□ 0.72
SUDS3-204ENST00000543473 SNTG2Q9NY99 539 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 MOSPD1Q9UJG1 213 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 DUSP12Q9UNI6 340 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 MANSC4A6NHS7 340 aaPredicted RBP19.58■□□□□ 0.72
SUDS3-204ENST00000543473 WBP4O75554 376 aaKnown RBP19.58■□□□□ 0.72
SUDS3-204ENST00000543473 PPIL2Q13356 520 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 PDZK1Q5T2W1 519 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 AMER2Q8N7J2 671 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 SERAC1Q96JX3 654 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 MRPL57Q9BQC6 102 aaKnown RBP19.58■□□□□ 0.72
SUDS3-204ENST00000543473 ENTPD7Q9NQZ7 604 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 KRT84Q9NSB2 600 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 DNAJC28Q9NX36 388 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 ZNF180Q9UJW8 692 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 UBIAD1Q9Y5Z9 338 aa19.58■□□□□ 0.72
SUDS3-204ENST00000543473 RAB10P61026 200 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 CPNE8Q86YQ8 564 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 DNAJC1Q96KC8 554 aaKnown RBP19.57■□□□□ 0.72
SUDS3-204ENST00000543473 SEMA4BQ9NPR2 832 aaPredicted RBP19.57■□□□□ 0.72
SUDS3-204ENST00000543473 LOC100506127A0A0U1RQW1 187 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 ODC1P11926 461 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 MAD2L1Q13257 205 aaPredicted RBP19.57■□□□□ 0.72
SUDS3-204ENST00000543473 MGAT5BQ3V5L5 792 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 PTPN20Q4JDL3 420 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 EGFLAMQ63HQ2 1017 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 COX4I2Q96KJ9 171 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 CAB39LQ9H9S4 337 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 TRIP4Q15650 581 aaPredicted RBP19.57■□□□□ 0.72
SUDS3-204ENST00000543473 C11orf74Q86VG3 221 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 RIOX2Q8IUF8 465 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 HOMEZQ8IX15 550 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 TRNAU1APQ9NX07 287 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms