RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 RHOT2Q8IXI1 618 aa16.55■□□□□ 0.24
CIT-212ENST00000543239 ZCCHC9Q8N567 271 aaKnown RBP16.55■□□□□ 0.24
CIT-212ENST00000543239 LZTR1Q8N653 840 aa16.55■□□□□ 0.24
CIT-212ENST00000543239 OR2AP1Q8NGE2 309 aa16.55■□□□□ 0.24
CIT-212ENST00000543239 OR14C36Q8NHC7 312 aa16.55■□□□□ 0.24
CIT-212ENST00000543239 GRIN3AQ8TCU5 1115 aa16.55■□□□□ 0.24
CIT-212ENST00000543239 HSPH1Q92598 858 aa16.55■□□□□ 0.24
CIT-212ENST00000543239 LRIG1Q96JA1 1093 aa16.55■□□□□ 0.24
CIT-212ENST00000543239 ANP32EQ9BTT0 268 aa16.55■□□□□ 0.24
CIT-212ENST00000543239 TM6SF2Q9BZW4 377 aa16.55■□□□□ 0.24
CIT-212ENST00000543239 KLC2Q9H0B6 622 aa16.55■□□□□ 0.24
CIT-212ENST00000543239 MIR1-1HGQ9H1L0 117 aa16.55■□□□□ 0.24
CIT-212ENST00000543239 DYRK4Q9NR20 520 aa16.55■□□□□ 0.24
CIT-212ENST00000543239 RCOR3Q9P2K3 495 aaPredicted RBP16.55■□□□□ 0.24
CIT-212ENST00000543239 INTUQ9ULD6 942 aa16.55■□□□□ 0.24
CIT-212ENST00000543239 ACTL7AQ9Y615 435 aa16.55■□□□□ 0.24
CIT-212ENST00000543239 WASF2Q9Y6W5 498 aa16.55■□□□□ 0.24
CIT-212ENST00000543239 NUMA1Q14980 2115 aa16.55■□□□□ 0.24
CIT-212ENST00000543239 FAM47DPA6NHR8 397 aa16.54■□□□□ 0.24
CIT-212ENST00000543239 ARHGAP33O14559 1287 aa16.54■□□□□ 0.24
CIT-212ENST00000543239 CDX4O14627 284 aaPredicted RBP16.54■□□□□ 0.24
CIT-212ENST00000543239 LEFTY1O75610 366 aa16.54■□□□□ 0.24
CIT-212ENST00000543239 TMCC1O94876 653 aa16.54■□□□□ 0.24
CIT-212ENST00000543239 SNRPD1P62314 119 aaKnown RBP16.54■□□□□ 0.24
CIT-212ENST00000543239 TXNRD3NBQ6F5E7 133 aa16.54■□□□□ 0.24
CIT-212ENST00000543239 ERMP1Q7Z2K6 904 aa16.54■□□□□ 0.24
CIT-212ENST00000543239 SLC35G2Q8TBE7 412 aa16.54■□□□□ 0.24
CIT-212ENST00000543239 FAM71BQ8TC56 605 aa16.54■□□□□ 0.24
CIT-212ENST00000543239 RFFLQ8WZ73 363 aa16.54■□□□□ 0.24
CIT-212ENST00000543239 CELF6Q96J87 481 aaKnown RBP16.54■□□□□ 0.24
CIT-212ENST00000543239 CSPG4P5Q96PW8 444 aa16.54■□□□□ 0.24
CIT-212ENST00000543239 HDAC8Q9BY41 377 aa16.54■□□□□ 0.24
CIT-212ENST00000543239 ZDHHC5Q9C0B5 715 aa16.54■□□□□ 0.24
CIT-212ENST00000543239 SLC39A8Q9C0K1 460 aa16.54■□□□□ 0.24
CIT-212ENST00000543239 PDFQ9HBH1 243 aa16.54■□□□□ 0.24
CIT-212ENST00000543239 PCDH18Q9HCL0 1135 aa16.54■□□□□ 0.24
CIT-212ENST00000543239 HECAQ9UBI9 543 aaPredicted RBP16.54■□□□□ 0.24
CIT-212ENST00000543239 PCDH15Q96QU1 1955 aa16.54■□□□□ 0.24
CIT-212ENST00000543239 GON4LQ3T8J9 2241 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 TBC1D3DA0A087WVF3 549 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 TBC1D3IA0A087WXS9 549 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 TBC1D3EA0A087X179 549 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 TBC1D3KA0A087X1G2 549 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 A0A1W2PPC4 97 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 TBC1D3FA6NER0 549 aaPredicted RBP16.53■□□□□ 0.24
CIT-212ENST00000543239 TBC1D3LB9A6J9 549 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 PLK4O00444 970 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 PRAMEF11O60813 436 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 MTA2O94776 668 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 TBC1D3HP0C7X1 549 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 ITGB7P26010 798 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 ARHGAP25P42331 645 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 SSR1P43307 286 aaKnown RBP16.53■□□□□ 0.24
CIT-212ENST00000543239 PAPOLAP51003 745 aaKnown RBP16.53■□□□□ 0.24
CIT-212ENST00000543239 AFF3P51826 1226 aaKnown RBP16.53■□□□□ 0.24
CIT-212ENST00000543239 ATXN3P54252 364 aaPredicted RBP16.53■□□□□ 0.24
CIT-212ENST00000543239 TCEAL1Q15170 157 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 POM121L1PQ3SYA9 428 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 ARSIQ5FYB1 569 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 PIP5KL1Q5T9C9 394 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 TBC1D3GQ6DHY5 549 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 TBC1D3CQ6IPX1 549 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 TMCO3Q6UWJ1 677 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 LEKR1Q6ZMV7 388 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 ERN2Q76MJ5 926 aaKnown RBP16.53■□□□□ 0.24
CIT-212ENST00000543239 DGLUCYQ7Z3D6 616 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 ARHGAP12Q8IWW6 846 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 CCDC170Q8IYT3 715 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 TBC1D3Q8IZP1 549 aaPredicted RBP16.53■□□□□ 0.24
CIT-212ENST00000543239 NPWQ8N729 165 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 TSC1Q92574 1164 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 ARRDC3Q96B67 414 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 GDAP1L1Q96MZ0 367 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 PANX2Q96RD6 677 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 ORAI3Q9BRQ5 295 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 ZDHHC6Q9H6R6 413 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 PREBQ9HCU5 417 aa16.53■□□□□ 0.24
CIT-212ENST00000543239 UBA2Q9UBT2 640 aaPredicted RBP16.53■□□□□ 0.24
CIT-212ENST00000543239 DCHS1Q96JQ0 3298 aa16.52■□□□□ 0.24
CIT-212ENST00000543239 C4orf47A7E2U8 309 aa16.52■□□□□ 0.24
CIT-212ENST00000543239 TM4SF5O14894 197 aa16.52■□□□□ 0.24
CIT-212ENST00000543239 LATO43561 262 aa16.52■□□□□ 0.24
CIT-212ENST00000543239 LCA5LO95447 670 aa16.52■□□□□ 0.24
CIT-212ENST00000543239 POP4O95707 220 aaKnown RBP16.52■□□□□ 0.24
CIT-212ENST00000543239 IGSF6O95976 241 aa16.52■□□□□ 0.24
CIT-212ENST00000543239 KRT7P08729 469 aa16.52■□□□□ 0.24
CIT-212ENST00000543239 NUDT1P36639 197 aa16.52■□□□□ 0.24
CIT-212ENST00000543239 GRIA4P48058 902 aa16.52■□□□□ 0.24
CIT-212ENST00000543239 CDH6P55285 790 aa16.52■□□□□ 0.24
CIT-212ENST00000543239 RHOAP61586 193 aa16.52■□□□□ 0.24
CIT-212ENST00000543239 KRT81Q14533 505 aa16.52■□□□□ 0.24
CIT-212ENST00000543239 TEAD4Q15561 434 aa16.52■□□□□ 0.24
CIT-212ENST00000543239 NEK5Q6P3R8 708 aa16.52■□□□□ 0.24
CIT-212ENST00000543239 TRIM69Q86WT6 500 aa16.52■□□□□ 0.24
CIT-212ENST00000543239 RYBPQ8N488 228 aaPredicted RBP16.52■□□□□ 0.24
CIT-212ENST00000543239 OSBPL1AQ9BXW6 950 aa16.52■□□□□ 0.24
CIT-212ENST00000543239 TM9SF3Q9HD45 589 aa16.52■□□□□ 0.24
CIT-212ENST00000543239 MFHAS1Q9Y4C4 1052 aa16.52■□□□□ 0.24
CIT-212ENST00000543239 PI4KAP42356 2102 aa16.52■□□□□ 0.23
CIT-212ENST00000543239 J3KR12 359 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms