RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 HEPHQ9BQS7 1158 aa18.7■□□□□ 0.58
COPS7A-216ENST00000543170 TM6SF2Q9BZW4 377 aa18.7■□□□□ 0.58
COPS7A-216ENST00000543170 SARDHQ9UL12 918 aa18.7■□□□□ 0.58
COPS7A-216ENST00000543170 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.7■□□□□ 0.58
COPS7A-216ENST00000543170 WASF2Q9Y6W5 498 aa18.7■□□□□ 0.58
COPS7A-216ENST00000543170 SDK1Q7Z5N4 2213 aa18.7■□□□□ 0.58
COPS7A-216ENST00000543170 EP300Q09472 2414 aaPredicted RBP18.7■□□□□ 0.58
COPS7A-216ENST00000543170 GVINP1Q7Z2Y8 2422 aa18.69■□□□□ 0.58
COPS7A-216ENST00000543170 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.69■□□□□ 0.58
COPS7A-216ENST00000543170 IGSF6O95976 241 aa18.69■□□□□ 0.58
COPS7A-216ENST00000543170 HOXD11P31277 338 aaPredicted RBP18.69■□□□□ 0.58
COPS7A-216ENST00000543170 CTNNA1P35221 906 aaKnown RBP18.69■□□□□ 0.58
COPS7A-216ENST00000543170 HOXD12P35452 270 aa18.69■□□□□ 0.58
COPS7A-216ENST00000543170 NAP1L1P55209 391 aaKnown RBP18.69■□□□□ 0.58
COPS7A-216ENST00000543170 RHOAP61586 193 aa18.69■□□□□ 0.58
COPS7A-216ENST00000543170 GALNT2Q10471 571 aa18.69■□□□□ 0.58
COPS7A-216ENST00000543170 TAZQ16635 292 aa18.69■□□□□ 0.58
COPS7A-216ENST00000543170 ODF2Q5BJF6 829 aa18.69■□□□□ 0.58
COPS7A-216ENST00000543170 TMCO4Q5TGY1 634 aa18.69■□□□□ 0.58
COPS7A-216ENST00000543170 PEAR1Q5VY43 1037 aaPredicted RBP18.69■□□□□ 0.58
COPS7A-216ENST00000543170 LYSMD4Q5XG99 296 aa18.69■□□□□ 0.58
COPS7A-216ENST00000543170 SLC9A4Q6AI14 798 aa18.69■□□□□ 0.58
COPS7A-216ENST00000543170 LEKR1Q6ZMV7 388 aa18.69■□□□□ 0.58
COPS7A-216ENST00000543170 ARHGAP36Q6ZRI8 547 aa18.69■□□□□ 0.58
COPS7A-216ENST00000543170 TP53INP2Q8IXH6 220 aa18.69■□□□□ 0.58
COPS7A-216ENST00000543170 TMEFF1Q8IYR6 380 aa18.69■□□□□ 0.58
COPS7A-216ENST00000543170 ATPAF2Q8N5M1 289 aa18.69■□□□□ 0.58
COPS7A-216ENST00000543170 GPR161Q8N6U8 529 aaKnown RBP18.69■□□□□ 0.58
COPS7A-216ENST00000543170 CHST14Q8NCH0 376 aa18.69■□□□□ 0.58
COPS7A-216ENST00000543170 PPP1R16AQ96I34 528 aa18.69■□□□□ 0.58
COPS7A-216ENST00000543170 OMDQ99983 421 aa18.69■□□□□ 0.58
COPS7A-216ENST00000543170 HECAQ9UBI9 543 aaPredicted RBP18.69■□□□□ 0.58
COPS7A-216ENST00000543170 LHX3Q9UBR4 397 aa18.69■□□□□ 0.58
COPS7A-216ENST00000543170 SERGEFQ9UGK8 458 aa18.69■□□□□ 0.58
COPS7A-216ENST00000543170 RALGAPA1Q6GYQ0 2036 aa18.69■□□□□ 0.58
COPS7A-216ENST00000543170 BCLAF3A2AJT9 711 aaKnown RBP18.68■□□□□ 0.58
COPS7A-216ENST00000543170 GRID2IPA4D2P6 1211 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 C10orf142B7Z368 130 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 MAFKO60675 156 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 LEFTY1O75610 366 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 RNASEH2AO75792 299 aaKnown RBP18.68■□□□□ 0.58
COPS7A-216ENST00000543170 SEMA4FO95754 770 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 ZFXP17010 805 aaPredicted RBP18.68■□□□□ 0.58
COPS7A-216ENST00000543170 ACSL1P33121 698 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 DHPSP49366 369 aaPredicted RBP18.68■□□□□ 0.58
COPS7A-216ENST00000543170 DNA2P51530 1060 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 ZNF33AQ06730 810 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 CCDC15Q0P6D6 951 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 CYTH1Q15438 398 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 PLA2G2CQ5R387 149 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 ZNF662Q6ZS27 426 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 CYP2U1Q7Z449 544 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 FAM124AQ86V42 546 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 ALYREFQ86V81 257 aaKnown RBP18.68■□□□□ 0.58
COPS7A-216ENST00000543170 SLC41A1Q8IVJ1 513 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 SYCE1Q8N0S2 351 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 HDDC3Q8N4P3 179 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 RNF10Q8N5U6 811 aaKnown RBP18.68■□□□□ 0.58
COPS7A-216ENST00000543170 KIAA1524Q8TCG1 905 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 ANP32BQ92688 251 aaKnown RBP18.68■□□□□ 0.58
COPS7A-216ENST00000543170 FATE1Q969F0 183 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 RBM41Q96IZ5 413 aaKnown RBP18.68■□□□□ 0.58
COPS7A-216ENST00000543170 GPR174Q9BXC1 333 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 OSBPL1AQ9BXW6 950 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 NEUROG2Q9H2A3 272 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 KDM4CQ9H3R0 1056 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 TPX2Q9ULW0 747 aaKnown RBP18.68■□□□□ 0.58
COPS7A-216ENST00000543170 SHROOM3Q8TF72 1996 aa18.68■□□□□ 0.58
COPS7A-216ENST00000543170 APOL1O14791 398 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 KRT86O43790 486 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 PALMO75781 387 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 POP4O95707 220 aaKnown RBP18.67■□□□□ 0.58
COPS7A-216ENST00000543170 PEX11BO96011 259 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 MX2P20592 715 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 ITGB7P26010 798 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 CTNNA2P26232 953 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 HSPA9P38646 679 aaKnown RBP18.67■□□□□ 0.58
COPS7A-216ENST00000543170 MPLP40238 635 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 GARSP41250 739 aaKnown RBP18.67■□□□□ 0.58
COPS7A-216ENST00000543170 CDKN2BP42772 138 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 PTGER3P43115 390 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 CSNK1DP48730 415 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 METAP1P53582 386 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 ADPRHP54922 357 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 RAD51Q06609 339 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 GRM3Q14832 879 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 AGBL4Q5VU57 503 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 PLD5Q8N7P1 536 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 NETO2Q8NC67 525 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 EXD1Q8NHP7 514 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 GRIN3AQ8TCU5 1115 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.67■□□□□ 0.58
COPS7A-216ENST00000543170 GANCQ8TET4 914 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 HSPA12BQ96MM6 686 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 HINFPQ9BQA5 517 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 CINPQ9BW66 212 aaPredicted RBP18.67■□□□□ 0.58
COPS7A-216ENST00000543170 HDAC8Q9BY41 377 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 ZDHHC6Q9H6R6 413 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 TRIM10Q9UDY6 481 aa18.67■□□□□ 0.58
COPS7A-216ENST00000543170 SEPT3Q9UH03 358 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms