RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 MAGEH1Q9H213 219 aa15.94■□□□□ 0.14
VPS33A-206ENST00000542310 TNKS2Q9H2K2 1166 aa15.94■□□□□ 0.14
VPS33A-206ENST00000542310 CCDC86Q9H6F5 360 aaKnown RBP15.94■□□□□ 0.14
VPS33A-206ENST00000542310 ACACAQ13085 2346 aa15.94■□□□□ 0.14
VPS33A-206ENST00000542310 ANKRD11Q6UB99 2663 aaPredicted RBP15.93■□□□□ 0.14
VPS33A-206ENST00000542310 TCRBV5S1A1TA0A578 114 aa15.93■□□□□ 0.14
VPS33A-206ENST00000542310 ZSCAN5CA6NGD5 496 aaPredicted RBP15.93■□□□□ 0.14
VPS33A-206ENST00000542310 SIGLEC16A6NMB1 481 aa15.93■□□□□ 0.14
VPS33A-206ENST00000542310 GOLGA8CPA6NN73 597 aa15.93■□□□□ 0.14
VPS33A-206ENST00000542310 RAMP2O60895 175 aa15.93■□□□□ 0.14
VPS33A-206ENST00000542310 RFPL3O75679 317 aa15.93■□□□□ 0.14
VPS33A-206ENST00000542310 LDOC1O95751 146 aaPredicted RBP15.93■□□□□ 0.14
VPS33A-206ENST00000542310 PLEKP08567 350 aaPredicted RBP15.93■□□□□ 0.14
VPS33A-206ENST00000542310 ADRB3P13945 408 aa15.93■□□□□ 0.14
VPS33A-206ENST00000542310 ACADVLP49748 655 aa15.93■□□□□ 0.14
VPS33A-206ENST00000542310 CCNHP51946 323 aaPredicted RBP15.93■□□□□ 0.14
VPS33A-206ENST00000542310 ILKQ13418 452 aa15.93■□□□□ 0.14
VPS33A-206ENST00000542310 TMEM259Q4ZIN3 620 aa15.93■□□□□ 0.14
VPS33A-206ENST00000542310 RAB6CQ53S08 254 aa15.93■□□□□ 0.14
VPS33A-206ENST00000542310 CARD16Q5EG05 197 aa15.93■□□□□ 0.14
VPS33A-206ENST00000542310 ARSIQ5FYB1 569 aa15.93■□□□□ 0.14
VPS33A-206ENST00000542310 RWDD4Q6NW29 188 aaKnown RBP15.93■□□□□ 0.14
VPS33A-206ENST00000542310 TMPRSS12Q86WS5 348 aa15.93■□□□□ 0.14
VPS33A-206ENST00000542310 CCDC185Q8N715 623 aa15.93■□□□□ 0.14
VPS33A-206ENST00000542310 KLHDC7BQ96G42 594 aa15.93■□□□□ 0.14
VPS33A-206ENST00000542310 RAB6CQ9H0N0 254 aa15.93■□□□□ 0.14
VPS33A-206ENST00000542310 HSD3B7Q9H2F3 369 aa15.93■□□□□ 0.14
VPS33A-206ENST00000542310 HPCAL4Q9UM19 191 aa15.93■□□□□ 0.14
VPS33A-206ENST00000542310 MYO6Q9UM54 1294 aa15.93■□□□□ 0.14
VPS33A-206ENST00000542310 ANKRD62A6NC57 917 aa15.92■□□□□ 0.14
VPS33A-206ENST00000542310 CD160O95971 181 aa15.92■□□□□ 0.14
VPS33A-206ENST00000542310 GSRP00390 522 aa15.92■□□□□ 0.14
VPS33A-206ENST00000542310 FERP16591 822 aa15.92■□□□□ 0.14
VPS33A-206ENST00000542310 DESP17661 470 aa15.92■□□□□ 0.14
VPS33A-206ENST00000542310 CDK11BP21127 795 aaKnown RBP15.92■□□□□ 0.14
VPS33A-206ENST00000542310 L1CAMP32004 1257 aa15.92■□□□□ 0.14
VPS33A-206ENST00000542310 RFC1P35251 1148 aaPredicted RBP15.92■□□□□ 0.14
VPS33A-206ENST00000542310 ACVRL1P37023 503 aa15.92■□□□□ 0.14
VPS33A-206ENST00000542310 ZNF143P52747 638 aaPredicted RBP15.92■□□□□ 0.14
VPS33A-206ENST00000542310 RPS21P63220 83 aaKnown RBP15.92■□□□□ 0.14
VPS33A-206ENST00000542310 EFHC2Q5JST6 749 aa15.92■□□□□ 0.14
VPS33A-206ENST00000542310 PRAMEF14Q5SWL7 426 aa15.92■□□□□ 0.14
VPS33A-206ENST00000542310 DNAJC24Q6P3W2 148 aa15.92■□□□□ 0.14
VPS33A-206ENST00000542310 ABI3BPQ7Z7G0 1075 aa15.92■□□□□ 0.14
VPS33A-206ENST00000542310 CASKIN2Q8WXE0 1202 aa15.92■□□□□ 0.14
VPS33A-206ENST00000542310 TSC1Q92574 1164 aa15.92■□□□□ 0.14
VPS33A-206ENST00000542310 RAB7BQ96AH8 199 aa15.92■□□□□ 0.14
VPS33A-206ENST00000542310 IFT43Q96FT9 208 aa15.92■□□□□ 0.14
VPS33A-206ENST00000542310 AGPAT1Q99943 283 aa15.92■□□□□ 0.14
VPS33A-206ENST00000542310 BPIFA3Q9BQP9 254 aa15.92■□□□□ 0.14
VPS33A-206ENST00000542310 OSBPL1AQ9BXW6 950 aa15.92■□□□□ 0.14
VPS33A-206ENST00000542310 NAT10Q9H0A0 1025 aaKnown RBP15.92■□□□□ 0.14
VPS33A-206ENST00000542310 NDFIP2Q9NV92 336 aa15.92■□□□□ 0.14
VPS33A-206ENST00000542310 ZFR2Q9UPR6 939 aaKnown RBP15.92■□□□□ 0.14
VPS33A-206ENST00000542310 FCF1Q9Y324 198 aaKnown RBP15.92■□□□□ 0.14
VPS33A-206ENST00000542310 APC2O95996 2303 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 A6NNZ2 444 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 FAM72CH0Y354 149 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 RNF103O00237 685 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 TAF4O00268 1085 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 CCP110O43303 1012 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 PCDH8O95206 1070 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 GJB6O95452 261 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 THEGLP0DJG4 465 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 PRLRP16471 622 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 HTR7P34969 479 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 HNF1BP35680 557 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 SNRPD1P62314 119 aaKnown RBP15.91■□□□□ 0.14
VPS33A-206ENST00000542310 TYRO3Q06418 890 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 POLD3Q15054 466 aaPredicted RBP15.91■□□□□ 0.14
VPS33A-206ENST00000542310 PPP1R15BQ5SWA1 713 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 FAM72AQ5TYM5 149 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 FAM72DQ6L9T8 149 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 WDR59Q6PJI9 974 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 DHRS13Q6UX07 377 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 KYAT3Q6YP21 454 aaKnown RBP15.91■□□□□ 0.14
VPS33A-206ENST00000542310 GCNT7Q6ZNI0 430 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 PARS2Q7L3T8 475 aaKnown RBP15.91■□□□□ 0.14
VPS33A-206ENST00000542310 SLFN11Q7Z7L1 901 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 PHLDB2Q86SQ0 1253 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 FAM72BQ86X60 149 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 DCP2Q8IU60 420 aaKnown RBP15.91■□□□□ 0.14
VPS33A-206ENST00000542310 EID2Q8N6I1 236 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 RTL3Q8N8U3 475 aaKnown RBP15.91■□□□□ 0.14
VPS33A-206ENST00000542310 OR2AP1Q8NGE2 309 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 GPR27Q9NS67 375 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 SEPT11Q9NVA2 429 aaKnown RBP15.91■□□□□ 0.14
VPS33A-206ENST00000542310 KLHL11Q9NVR0 708 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 DNAI1Q9UI46 699 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 FADS3Q9Y5Q0 445 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 MYLKQ15746 1914 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 KNTC1P50748 2209 aa15.91■□□□□ 0.14
VPS33A-206ENST00000542310 LAMA5O15230 3695 aa15.9■□□□□ 0.14
VPS33A-206ENST00000542310 ADAMTS20P59510 1910 aa15.9■□□□□ 0.14
VPS33A-206ENST00000542310 TDRD6O60522 2096 aaKnown RBP15.9■□□□□ 0.14
VPS33A-206ENST00000542310 WASH4PA8MWX3 477 aa15.9■□□□□ 0.14
VPS33A-206ENST00000542310 SLC31A1O15431 190 aa15.9■□□□□ 0.14
VPS33A-206ENST00000542310 BNIP3Q12983 259 aa15.9■□□□□ 0.14
VPS33A-206ENST00000542310 CAMK2BQ13554 666 aa15.9■□□□□ 0.14
VPS33A-206ENST00000542310 FBXL19Q6PCT2 694 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms