RNA–Protein interactions for RNA: ENST00000541614.5

LRTOMT-218, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-218ENST00000541614 GRIA4P48058 902 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 AFF3P51826 1226 aaKnown RBP6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 CCNHP51946 323 aaPredicted RBP6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 ATXN3P54252 364 aaPredicted RBP6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 SNRPD1P62314 119 aaKnown RBP6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 FOXK2Q01167 660 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 SLC25A11Q02978 314 aaKnown RBP6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 CCDC15Q0P6D6 951 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 GRIK2Q13002 908 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 SERINC3Q13530 473 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 DPYSQ14117 519 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 ARSIQ5FYB1 569 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 PPP6R3Q5H9R7 873 aaPredicted RBP6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 KCNT1Q5JUK3 1230 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 PIP5KL1Q5T9C9 394 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 AFMIDQ63HM1 303 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 ZNF354CQ86Y25 554 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 MINDY1Q8N5J2 469 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 LZTR1Q8N653 840 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 TC2NQ8N9U0 490 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 OR2AP1Q8NGE2 309 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 OR14C36Q8NHC7 312 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 FAM71BQ8TC56 605 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 ARRDC3Q96B67 414 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 MRFAP1L1Q96HT8 127 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 PPP1R16AQ96I34 528 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 LRIG1Q96JA1 1093 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 BTBD6Q96KE9 485 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 CCDC42Q96M95 316 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 CHP1Q99653 195 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 HEPHQ9BQS7 1158 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 PACSIN1Q9BY11 444 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 HDAC8Q9BY41 377 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 TM6SF2Q9BZW4 377 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 KLC2Q9H0B6 622 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 RBSNQ9H1K0 784 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 ZWILCHQ9H900 591 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 NHEJ1Q9H9Q4 299 aaPredicted RBP6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 PDFQ9HBH1 243 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 PREBQ9HCU5 417 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 TM9SF3Q9HD45 589 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 FSCN3Q9NQT6 498 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 DYRK4Q9NR20 520 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 CWC15Q9P013 229 aaKnown RBP6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 CTTNBP2NLQ9P2B4 639 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 ACTL7AQ9Y615 435 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 TMEM131Q92545 1883 aa6.38□□□□□ -1.39
LRTOMT-218ENST00000541614 ASCC3Q8N3C0 2202 aaKnown RBP6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 TBC1D3DA0A087WVF3 549 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 TBC1D3IA0A087WXS9 549 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 TBC1D3EA0A087X179 549 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 TBC1D3KA0A087X1G2 549 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 TBC1D3FA6NER0 549 aaPredicted RBP6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 ARHGAP42A6NI28 874 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 UPK3BL1B0FP48 263 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 TBC1D3LB9A6J9 549 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 UPK3BL2E5RIL1 263 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 RNF103O00237 685 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 PLK4O00444 970 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 BUB1O43683 1085 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 PRAMEF11O60813 436 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 OPHN1O60890 802 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 LEFTY1O75610 366 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 GJB3O75712 270 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 MTA2O94776 668 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 IGSF6O95976 241 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 TBC1D3HP0C7X1 549 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 CSRP1P21291 193 aaKnown RBP6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 ITGB7P26010 798 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 MAN1A1P33908 653 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 PAPOLAP51003 745 aaKnown RBP6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 DNA2P51530 1060 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 ZNF75DP51815 510 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 NEK3P51956 506 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 TAS2R38P59533 333 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 PPP2CBP62714 309 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 RACK1P63244 317 aaKnown RBP6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 PPP2CAP67775 309 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 BNC1Q01954 994 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 TCEAL1Q15170 157 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 TEAD4Q15561 434 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 HADHQ16836 314 aaKnown RBP6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 SMTNL2Q2TAL5 461 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 POM121L1PQ3SYA9 428 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 TBC1D3GQ6DHY5 549 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 TXNRD3NBQ6F5E7 133 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 TBC1D3CQ6IPX1 549 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 NEK5Q6P3R8 708 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 IL27RAQ6UWB1 636 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 LEKR1Q6ZMV7 388 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 ERN2Q76MJ5 926 aaKnown RBP6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 POLNQ7Z5Q5 900 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 PRPF39Q86UA1 669 aaKnown RBP6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 TRIM69Q86WT6 500 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 ARHGAP12Q8IWW6 846 aa6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 TBC1D3Q8IZP1 549 aaPredicted RBP6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 RYBPQ8N488 228 aaPredicted RBP6.37□□□□□ -1.39
LRTOMT-218ENST00000541614 NPWQ8N729 165 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms