RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 MMS19Q96T76 1030 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 HTATIP2Q9BUP3 242 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 TRIM31Q9BZY9 425 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 KCNK9Q9NPC2 374 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 SEPT11Q9NVA2 429 aaKnown RBP4.52□□□□□ -1.69
SNHG1-217ENST00000541578 THAP1Q9NVV9 213 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 KCND2Q9NZV8 630 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 HCN3Q9P1Z3 774 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 LIMA1Q9UHB6 759 aaKnown RBP4.52□□□□□ -1.69
SNHG1-217ENST00000541578 RPS6KA6Q9UK32 745 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 SARDHQ9UL12 918 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 NAALADL1Q9UQQ1 740 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 OSGIN2Q9Y236 505 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 BTBD3Q9Y2F9 522 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 MIA2Q96PC5 1412 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 SYNMO15061 1565 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 UGGT1Q9NYU2 1555 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 JCADQ9P266 1359 aa4.52□□□□□ -1.69
SNHG1-217ENST00000541578 LRRC7Q96NW7 1537 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 KDM5DQ9BY66 1539 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 IQGAP1P46940 1657 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 WDR17Q8IZU2 1322 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 SMIM35A0A1B0GVV1 85 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 hCG_1807616A0A1W2PRN6 198 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 A0A1W2PRQ8 180 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 GAGE10A6NGK3 116 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 BTBD19C9JJ37 291 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 P4HA2O15460 535 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 HBP1O60381 514 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 PTP4A3O75365 173 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 GCATO75600 419 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 METTL18O95568 372 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 TSPY4P0CV99 314 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 TSPY10P0CW01 314 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 TMIGD3P0DMS9 266 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-217ENST00000541578 CYP2A6P11509 494 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-217ENST00000541578 CYP4B1P13584 511 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 HOXD13P35453 343 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 RPS6KA3P51812 740 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 COPB1P53618 953 aaKnown RBP4.51□□□□□ -1.69
SNHG1-217ENST00000541578 OAZ1P54368 228 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 EIF3BP55884 814 aaKnown RBP4.51□□□□□ -1.69
SNHG1-217ENST00000541578 PRPF4BQ13523 1007 aaKnown RBP4.51□□□□□ -1.69
SNHG1-217ENST00000541578 FAM187BQ17R55 369 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 TMEM63BQ5T3F8 832 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 GRHL2Q6ISB3 625 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 INO80CQ6PI98 192 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-217ENST00000541578 C16orf89Q6UX73 402 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 IKBIPQ70UQ0 350 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 KRT77Q7Z794 578 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 CNGA4Q8IV77 575 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 CCDC105Q8IYK2 499 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 PNPLA1Q8N8W4 532 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 LSM14AQ8ND56 463 aaKnown RBP4.51□□□□□ -1.69
SNHG1-217ENST00000541578 SCFD2Q8WU76 684 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 POMGNT1Q8WZA1 660 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 NCSTNQ92542 709 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 RPL36ALQ969Q0 106 aaKnown RBP4.51□□□□□ -1.69
SNHG1-217ENST00000541578 CTHRC1Q96CG8 243 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 FEM1CQ96JP0 617 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 HS6ST2Q96MM7 605 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 EYA3Q99504 573 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 SLF1Q9BQI6 1058 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 RXFP3Q9NSD7 469 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 IL1RAPL1Q9NZN1 696 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 CFDP1Q9UEE9 299 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-217ENST00000541578 RCE1Q9Y256 329 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 COPG1Q9Y678 874 aaKnown RBP4.51□□□□□ -1.69
SNHG1-217ENST00000541578 KIAA1107Q9UPP5 1409 aa4.51□□□□□ -1.69
SNHG1-217ENST00000541578 LRRC9Q6ZRR7 1453 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 VWDEQ8N2E2 1590 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 CYP2D7A0A087X1C5 515 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 TEX13CA0A0J9YWL9 993 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 GOLGA6L10A0A0M3HER8 536 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 A0A0U1RQG5 324 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-217ENST00000541578 C16orf96A6NNT2 1141 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 KCNU1A8MYU2 1149 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 SPRY2O43597 315 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 STRNO43815 780 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 DHX16O60231 1041 aaKnown RBP4.5□□□□□ -1.69
SNHG1-217ENST00000541578 MT-CO3P00414 261 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 APOA4P06727 396 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 CYP3A4P08684 503 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 GSTM2P28161 218 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 EPHA8P29322 1005 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-217ENST00000541578 ABCD1P33897 745 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 BSGP35613 385 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 DIO1P49895 249 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 JAK3P52333 1124 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 TERF1P54274 439 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 ARHGAP8P85298 464 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 CREB5Q02930 508 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 LMAN2Q12907 356 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 LRMPQ12912 555 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 C11orf87Q6NUJ2 197 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 SLC30A6Q6NXT4 461 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 PDXDC1Q6P996 788 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 TMEM154Q6P9G4 183 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 SLC2A7Q6PXP3 512 aa4.5□□□□□ -1.69
SNHG1-217ENST00000541578 TTC39CQ8N584 583 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms