RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 PCDH15Q96QU1 1955 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 FAM47DPA6NHR8 397 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 J3KR12 359 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 CDX4O14627 284 aaPredicted RBP17.19■□□□□ 0.34
CD9-209ENST00000540891 SLC30A4O14863 429 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 SLC7A4O43246 635 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 PLRG1O43660 514 aaKnown RBP17.19■□□□□ 0.34
CD9-209ENST00000540891 LEFTY1O75610 366 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 FSBPO95073 299 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 PRNPP04156 253 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 CFIP05156 583 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 CD48P09326 243 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 ENGP17813 658 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 AMPD1P23109 780 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 GKP32189 559 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 MAN1A1P33908 653 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 RECQLP46063 649 aaPredicted RBP17.19■□□□□ 0.34
CD9-209ENST00000540891 DNA2P51530 1060 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 TAS2R38P59533 333 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 TCEAL1Q15170 157 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 INO80DQ53TQ3 878 aaPredicted RBP17.19■□□□□ 0.34
CD9-209ENST00000540891 PIP5KL1Q5T9C9 394 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 STPG1Q5TH74 334 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 ARHGAP36Q6ZRI8 547 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 ZCCHC9Q8N567 271 aaKnown RBP17.19■□□□□ 0.34
CD9-209ENST00000540891 OR2T34Q8NGX1 318 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 OR6K2Q8NGY2 324 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 OR14C36Q8NHC7 312 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 GRIN3AQ8TCU5 1115 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 PANX2Q96RD6 677 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 HEPHQ9BQS7 1158 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 NUSAP1Q9BXS6 441 aaKnown RBP17.19■□□□□ 0.34
CD9-209ENST00000540891 MIR1-1HGQ9H1L0 117 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 EBF2Q9HAK2 575 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 HECAQ9UBI9 543 aaPredicted RBP17.19■□□□□ 0.34
CD9-209ENST00000540891 SUSD2Q9UGT4 822 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 INTUQ9ULD6 942 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 SLC6A14Q9UN76 642 aa17.19■□□□□ 0.34
CD9-209ENST00000540891 DNAH14Q0VDD8 3507 aa17.18■□□□□ 0.34
CD9-209ENST00000540891 LAMA1P25391 3075 aa17.18■□□□□ 0.34
CD9-209ENST00000540891 LRRC72A6NJI9 287 aa17.18■□□□□ 0.34
CD9-209ENST00000540891 KPNA3O00505 521 aaPredicted RBP17.18■□□□□ 0.34
CD9-209ENST00000540891 PRAMEF11O60813 436 aa17.18■□□□□ 0.34
CD9-209ENST00000540891 GSRP00390 522 aa17.18■□□□□ 0.34
CD9-209ENST00000540891 ARL4AP40617 200 aa17.18■□□□□ 0.34
CD9-209ENST00000540891 SSR1P43307 286 aaKnown RBP17.18■□□□□ 0.34
CD9-209ENST00000540891 CDH6P55285 790 aa17.18■□□□□ 0.34
CD9-209ENST00000540891 PPP2CBP62714 309 aa17.18■□□□□ 0.34
CD9-209ENST00000540891 PPP2CAP67775 309 aa17.18■□□□□ 0.34
CD9-209ENST00000540891 MMRN1Q13201 1228 aa17.18■□□□□ 0.34
CD9-209ENST00000540891 MESDQ14696 234 aa17.18■□□□□ 0.34
CD9-209ENST00000540891 CYTH1Q15438 398 aa17.18■□□□□ 0.34
CD9-209ENST00000540891 HADHQ16836 314 aaKnown RBP17.18■□□□□ 0.34
CD9-209ENST00000540891 ATXN7L2Q5T6C5 722 aaPredicted RBP17.18■□□□□ 0.34
CD9-209ENST00000540891 RABEPKQ7Z6M1 372 aa17.18■□□□□ 0.34
CD9-209ENST00000540891 RHOT2Q8IXI1 618 aa17.18■□□□□ 0.34
CD9-209ENST00000540891 OR2AP1Q8NGE2 309 aa17.18■□□□□ 0.34
CD9-209ENST00000540891 CASKIN2Q8WXE0 1202 aa17.18■□□□□ 0.34
CD9-209ENST00000540891 RFFLQ8WZ73 363 aa17.18■□□□□ 0.34
CD9-209ENST00000540891 SNX19Q92543 992 aa17.18■□□□□ 0.34
CD9-209ENST00000540891 LHX3Q9UBR4 397 aa17.18■□□□□ 0.34
CD9-209ENST00000540891 A0A1B0GTW7 788 aa17.17■□□□□ 0.34
CD9-209ENST00000540891 ARHGAP42A6NI28 874 aa17.17■□□□□ 0.34
CD9-209ENST00000540891 TMEM110-MUSTN1A8MSY1 372 aa17.17■□□□□ 0.34
CD9-209ENST00000540891 TM4SF5O14894 197 aa17.17■□□□□ 0.34
CD9-209ENST00000540891 BCAT2O15382 392 aaPredicted RBP17.17■□□□□ 0.34
CD9-209ENST00000540891 GNSP15586 552 aa17.17■□□□□ 0.34
CD9-209ENST00000540891 CD27P26842 260 aa17.17■□□□□ 0.34
CD9-209ENST00000540891 GJC1P36383 396 aa17.17■□□□□ 0.34
CD9-209ENST00000540891 PUM1Q14671 1186 aaKnown RBP eCLIP17.17■□□□□ 0.34
CD9-209ENST00000540891 CCDC170Q8IYT3 715 aa17.17■□□□□ 0.34
CD9-209ENST00000540891 ZDHHC6Q9H6R6 413 aa17.17■□□□□ 0.34
CD9-209ENST00000540891 KLHL11Q9NVR0 708 aa17.17■□□□□ 0.34
CD9-209ENST00000540891 RCOR3Q9P2K3 495 aaPredicted RBP17.17■□□□□ 0.34
CD9-209ENST00000540891 UBA2Q9UBT2 640 aaPredicted RBP17.17■□□□□ 0.34
CD9-209ENST00000540891 LCMT1Q9UIC8 334 aa17.17■□□□□ 0.34
CD9-209ENST00000540891 TFR2Q9UP52 801 aa17.17■□□□□ 0.34
CD9-209ENST00000540891 A0A1W2PPC4 97 aa17.16■□□□□ 0.34
CD9-209ENST00000540891 SOWAHDA6NJG2 315 aa17.16■□□□□ 0.34
CD9-209ENST00000540891 C4orf47A7E2U8 309 aa17.16■□□□□ 0.34
CD9-209ENST00000540891 DFFAO00273 331 aa17.16■□□□□ 0.34
CD9-209ENST00000540891 SDHBP21912 280 aa17.16■□□□□ 0.34
CD9-209ENST00000540891 ARHGAP25P42331 645 aa17.16■□□□□ 0.34
CD9-209ENST00000540891 PI4KAP42356 2102 aa17.16■□□□□ 0.34
CD9-209ENST00000540891 MAGEA1P43355 309 aa17.16■□□□□ 0.34
CD9-209ENST00000540891 CCR5P51681 352 aa17.16■□□□□ 0.34
CD9-209ENST00000540891 SNRPD1P62314 119 aaKnown RBP17.16■□□□□ 0.34
CD9-209ENST00000540891 BNC1Q01954 994 aa17.16■□□□□ 0.34
CD9-209ENST00000540891 DPYSL3Q14195 570 aa17.16■□□□□ 0.34
CD9-209ENST00000540891 KRT81Q14533 505 aa17.16■□□□□ 0.34
CD9-209ENST00000540891 MYLK3Q32MK0 819 aa17.16■□□□□ 0.34
CD9-209ENST00000540891 TMCO3Q6UWJ1 677 aa17.16■□□□□ 0.34
CD9-209ENST00000540891 ERN2Q76MJ5 926 aaKnown RBP17.16■□□□□ 0.34
CD9-209ENST00000540891 PARS2Q7L3T8 475 aaKnown RBP17.16■□□□□ 0.34
CD9-209ENST00000540891 RYBPQ8N488 228 aaPredicted RBP17.16■□□□□ 0.34
CD9-209ENST00000540891 LZTR1Q8N653 840 aa17.16■□□□□ 0.34
CD9-209ENST00000540891 RTKNQ9BST9 563 aa17.16■□□□□ 0.34
CD9-209ENST00000540891 HDAC8Q9BY41 377 aa17.16■□□□□ 0.34
CD9-209ENST00000540891 KDM4CQ9H3R0 1056 aa17.16■□□□□ 0.34
CD9-209ENST00000540891 TM9SF3Q9HD45 589 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms