RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 FTH1P02794 183 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 LTA4HP09960 611 aaKnown RBP14.28□□□□□ -0.12
USP3-204ENST00000540797 ITIH4Q14624 930 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 MTDHQ86UE4 582 aaKnown RBP14.28□□□□□ -0.12
USP3-204ENST00000540797 SLC41A1Q8IVJ1 513 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 OR6K2Q8NGY2 324 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 MCRS1Q96EZ8 462 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 ALG9Q9H6U8 611 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 TPP1O14773 563 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 C1RP00736 705 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 ELFN1P0C7U0 828 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 RPL17P18621 184 aaKnown RBP14.27□□□□□ -0.12
USP3-204ENST00000540797 HNRNPH3P31942 346 aaKnown RBP14.27□□□□□ -0.12
USP3-204ENST00000540797 WLSQ5T9L3 541 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 PPP2R2DQ66LE6 453 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 LRRC8BQ6P9F7 803 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 ZNF655Q8N720 491 aaPredicted RBP14.27□□□□□ -0.12
USP3-204ENST00000540797 PCED1BQ96HM7 432 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 SPACA7Q96KW9 195 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 ASB2Q96Q27 587 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 CAAP1Q9H8G2 361 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 PCYOX1Q9UHG3 505 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 HAO1Q9UJM8 370 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 TBC1D3DA0A087WVF3 549 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 TBC1D3IA0A087WXS9 549 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 TBC1D3EA0A087X179 549 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 TBC1D3KA0A087X1G2 549 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 TBC1D3FA6NER0 549 aaPredicted RBP14.27□□□□□ -0.12
USP3-204ENST00000540797 TBC1D3LB9A6J9 549 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 AGRPO00253 132 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 TBC1D3HP0C7X1 549 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 CLCN5P51795 746 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 TBC1D3GQ6DHY5 549 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 TBC1D3CQ6IPX1 549 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 PRR23CQ6ZRP0 262 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 RASAL3Q86YV0 1011 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 TBC1D3Q8IZP1 549 aaPredicted RBP14.27□□□□□ -0.12
USP3-204ENST00000540797 ATL1Q8WXF7 558 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 FZD8Q9H461 694 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 SCN3BQ9NY72 215 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.27□□□□□ -0.12
USP3-204ENST00000540797 TAGLN3Q9UI15 199 aa14.27□□□□□ -0.12
USP3-204ENST00000540797 FGF1P05230 155 aa14.27□□□□□ -0.13
USP3-204ENST00000540797 H2AFXP16104 143 aaPredicted RBP14.27□□□□□ -0.13
USP3-204ENST00000540797 TKTP29401 623 aaKnown RBP14.27□□□□□ -0.13
USP3-204ENST00000540797 GPR15P49685 360 aa14.27□□□□□ -0.13
USP3-204ENST00000540797 APLP1P51693 650 aa14.27□□□□□ -0.13
USP3-204ENST00000540797 IRF8Q02556 426 aa14.27□□□□□ -0.13
USP3-204ENST00000540797 GRM3Q14832 879 aa14.27□□□□□ -0.13
USP3-204ENST00000540797 PTPRNQ16849 979 aa14.27□□□□□ -0.13
USP3-204ENST00000540797 SLC10A6Q3KNW5 377 aa14.27□□□□□ -0.13
USP3-204ENST00000540797 CYP20A1Q6UW02 462 aa14.27□□□□□ -0.13
USP3-204ENST00000540797 PRSS55Q6UWB4 352 aaPredicted RBP14.27□□□□□ -0.13
USP3-204ENST00000540797 BTN2A2Q8WVV5 523 aa14.27□□□□□ -0.13
USP3-204ENST00000540797 ING5Q8WYH8 240 aa14.27□□□□□ -0.13
USP3-204ENST00000540797 INPP5DQ92835 1189 aa14.27□□□□□ -0.13
USP3-204ENST00000540797 PHF21AQ96BD5 680 aa14.27□□□□□ -0.13
USP3-204ENST00000540797 DPEP3Q9H4B8 488 aa14.27□□□□□ -0.13
USP3-204ENST00000540797 LRRC19Q9H756 370 aa14.27□□□□□ -0.13
USP3-204ENST00000540797 IMPAD1Q9NX62 359 aa14.27□□□□□ -0.13
USP3-204ENST00000540797 NID2Q14112 1375 aa14.27□□□□□ -0.13
USP3-204ENST00000540797 RGS14O43566 566 aa14.27□□□□□ -0.13
USP3-204ENST00000540797 PFDN1O60925 122 aa14.27□□□□□ -0.13
USP3-204ENST00000540797 TEX9Q8N6V9 391 aa14.27□□□□□ -0.13
USP3-204ENST00000540797 HNRNPABQ99729 332 aaKnown RBP14.27□□□□□ -0.13
USP3-204ENST00000540797 KANSL1LA0AUZ9 987 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 ALBP02768 609 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 CCDC166P0CW27 439 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 TACR2P21452 398 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 CCND3P30281 292 aaPredicted RBP14.26□□□□□ -0.13
USP3-204ENST00000540797 WNT3AP56704 352 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 ACSM2AQ08AH3 577 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 PWP1Q13610 501 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 ATAD3BQ5T9A4 648 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 ACSM2BQ68CK6 577 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 KYAT3Q6YP21 454 aaKnown RBP14.26□□□□□ -0.13
USP3-204ENST00000540797 KLHL28Q9NXS3 571 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 RCCD1A6NED2 376 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 RASSF9O75901 435 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 PFKFB4Q16877 469 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 ECHDC2Q86YB7 292 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 DQX1Q8TE96 717 aaKnown RBP14.26□□□□□ -0.13
USP3-204ENST00000540797 MYO19Q96H55 970 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 RIPOR3Q96MK2 946 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 OLFM3Q96PB7 478 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 SEMA4BQ9NPR2 832 aaPredicted RBP14.26□□□□□ -0.13
USP3-204ENST00000540797 MSLNQ13421 630 aaPredicted RBP14.26□□□□□ -0.13
USP3-204ENST00000540797 PARP15Q460N3 678 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 IL27RAQ6UWB1 636 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 FAM124BQ9H5Z6 455 aaPredicted RBP14.26□□□□□ -0.13
USP3-204ENST00000540797 ARMC7Q9H6L4 198 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 STARD13Q9Y3M8 1113 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 CACNB4O00305 520 aaPredicted RBP14.26□□□□□ -0.13
USP3-204ENST00000540797 MAGEC1O60732 1142 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 VPS4BO75351 444 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 WARSP23381 471 aaKnown RBP14.26□□□□□ -0.13
USP3-204ENST00000540797 FLT3P36888 993 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 ZNF844Q08AG5 666 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 GRB14Q14449 540 aa14.26□□□□□ -0.13
USP3-204ENST00000540797 PRELID2Q8N945 189 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms