RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 ISPDA4D126 451 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 CD3EAPO15446 510 aaKnown RBP6.13□□□□□ -1.43
PTPRD-214ENST00000540109 VPS4BO75351 444 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 HOXD8P13378 290 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-214ENST00000540109 NPR3P17342 541 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 PTPN5P54829 565 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 ECT2LQ008S8 904 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 HIF1AQ16665 826 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 CTC1Q2NKJ3 1217 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 TMEM270Q6UE05 265 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 RELL1Q8IUW5 271 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 HSPH1Q92598 858 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 RNF25Q96BH1 459 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-214ENST00000540109 C18orf8Q96DM3 657 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 ZNF285Q96NJ3 590 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 YME1L1Q96TA2 773 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 C17orf80Q9BSJ5 609 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 SLC6A15Q9H2J7 730 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 DYRK4Q9NR20 520 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 RBPJLQ9UBG7 517 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 PLCL2Q9UPR0 1127 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 DRG1Q9Y295 367 aaKnown RBP6.13□□□□□ -1.43
PTPRD-214ENST00000540109 DGKBQ9Y6T7 804 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 SMCHD1A6NHR9 2005 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 SLC15A5A6NIM6 579 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 TISP43B9A030 160 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 TFECO14948 347 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-214ENST00000540109 C7P10643 843 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 RALBP11234 206 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 CD19P15391 556 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 ETFBP38117 255 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 MAGEA4P43358 317 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 PPM1FP49593 454 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-214ENST00000540109 CLK3P49761 638 aaKnown RBP6.13□□□□□ -1.43
PTPRD-214ENST00000540109 MRPS22P82650 360 aaKnown RBP6.13□□□□□ -1.43
PTPRD-214ENST00000540109 CDK16Q00536 496 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 TMEM62Q0P6H9 643 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 RASSF6Q6ZTQ3 369 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 RHPN2Q8IUC4 686 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 ULK2Q8IYT8 1036 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 TDRD5Q8NAT2 981 aaKnown RBP6.13□□□□□ -1.43
PTPRD-214ENST00000540109 RNF149Q8NC42 400 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 SPATA18Q8TC71 538 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 FAF2Q96CS3 445 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 OTUB1Q96FW1 271 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-214ENST00000540109 OXNAD1Q96HP4 312 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-214ENST00000540109 HEPHQ9BQS7 1158 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 RERGLQ9H628 205 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 CLK4Q9HAZ1 481 aaKnown RBP6.13□□□□□ -1.43
PTPRD-214ENST00000540109 PNPLA8Q9NP80 782 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 SEC24AO95486 1093 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 NPPAP01160 153 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 ZNF23P17027 643 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 BGNP21810 368 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 F8A1P23610 371 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 GNG2P59768 71 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 SP2Q02086 613 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 RHAGQ02094 409 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 VAC14Q08AM6 782 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 MAPRE1Q15691 268 aaKnown RBP6.13□□□□□ -1.43
PTPRD-214ENST00000540109 SAMD4BQ5PRF9 694 aaKnown RBP6.13□□□□□ -1.43
PTPRD-214ENST00000540109 TTC39BQ5VTQ0 682 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-214ENST00000540109 SCARA3Q6AZY7 606 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 ZDHHC17Q8IUH5 632 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 ART4Q93070 314 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 TRIM62Q9BVG3 475 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 EMILIN2Q9BXX0 1053 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 PTPRHQ9HD43 1115 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 KLHL42Q9P2K6 505 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 BAIAP2Q9UQB8 552 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 MYH10P35580 1976 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 ANKRD33BA6NCL7 494 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 CCNT2O60583 730 aaKnown RBP6.13□□□□□ -1.43
PTPRD-214ENST00000540109 VNN1O95497 513 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 CRYZL1O95825 349 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 MMP8P22894 467 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 LRP8Q14114 963 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 STK11Q15831 433 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 ZNF829Q3KNS6 432 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-214ENST00000540109 FAM45BPQ6NSW5 357 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 CRTC1Q6UUV9 634 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 EXT2Q93063 718 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 CDC42EP4Q9H3Q1 356 aaKnown RBP6.13□□□□□ -1.43
PTPRD-214ENST00000540109 BCAS3Q9H6U6 928 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 TAS2R14Q9NYV8 317 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 PCDH10Q9P2E7 1040 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 WASF2Q9Y6W5 498 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 GSAPA4D1B5 854 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 KRT87PA6NCN2 255 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 CAPN8A6NHC0 703 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 FADS2P1A8MWK0 482 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 CLOCKO15516 846 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 KPNA6O60684 536 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 ITGA10O75578 1167 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 TCEA3O75764 348 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 TPPPO94811 219 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 S100A6P06703 90 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 TCEA1P23193 301 aaKnown RBP6.13□□□□□ -1.43
PTPRD-214ENST00000540109 SCNN1AP37088 669 aa6.13□□□□□ -1.43
PTPRD-214ENST00000540109 PTGIRP43119 386 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms