RNA–Protein interactions for RNA: ENST00000539310.5

PLS3-209, Transcript of plastin 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene PLS3, Length 3,037 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLS3-209	ENST00000539310	SOX17	Q9H6I2	414 aa	Predicted RBP	4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	FANCE	Q9HB96	536 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	RIC8B	Q9NVN3	520 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	DUS2	Q9NX74	493 aa	Known RBP	4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	GTSE1	Q9NYZ3	720 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	SUCO	Q9UBS9	1254 aa	Known RBP	4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	SEPT9	Q9UHD8	586 aa	Predicted RBP	4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	IPO11	Q9UI26	975 aa	Known RBP	4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	PSME2	Q9UL46	239 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	SLC39A10	Q9ULF5	831 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	SLC27A5	Q9Y2P5	690 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	N6AMT1	Q9Y5N5	214 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	LAMB1	P07942	1786 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	COL22A1	Q8NFW1	1626 aa	Predicted RBP	4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	TAF1	P21675	1872 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	ZNF541	Q9H0D2	1346 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	TCRBV5S1A1T	A0A578	114 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	TCAF2	A6NFQ2	919 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	4.61	□□□□□ -1.67
PLS3-209	ENST00000539310		H0YCG3	227 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	DHX15	O43143	795 aa	Known RBP	4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	DYNC1LI2	O43237	492 aa	Predicted RBP	4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	MED7	O43513	233 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	C2	P06681	752 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	INHBB	P09529	407 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	HDC	P19113	662 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	MATN1	P21941	496 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	CCNC	P24863	283 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	PSMA4	P25789	261 aa	Known RBP	4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	GABRB3	P28472	473 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	ADSL	P30566	484 aa	Predicted RBP	4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	OPRL1	P41146	370 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	SLC7A2	P52569	658 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	IRF9	Q00978	393 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	SPP2	Q13103	211 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	RFTN1	Q14699	578 aa	Predicted RBP	4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	OXA1L	Q15070	435 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	ANO4	Q32M45	955 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	ARL13B	Q3SXY8	428 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	SAMD4B	Q5PRF9	694 aa	Known RBP	4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	APOBEC3H	Q6NTF7	200 aa	Known RBP	4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	BTLA	Q7Z6A9	289 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	ZBTB33	Q86T24	672 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	IFNE	Q86WN2	208 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	SIX5	Q8N196	739 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	SNX31	Q8N9S9	440 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	DNAAF3	Q8N9W5	541 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	MCPH1	Q8NEM0	835 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	SHCBP1	Q8NEM2	672 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	ANKK1	Q8NFD2	765 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	RAB2B	Q8WUD1	216 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	RXFP2	Q8WXD0	754 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	TANK	Q92844	425 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	GLT1D1	Q96MS3	346 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	ZNF347	Q96SE7	839 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	SLC39A3	Q9BRY0	314 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	NTPCR	Q9BSD7	190 aa	Known RBP	4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	C9orf16	Q9BUW7	83 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	DGCR6L	Q9BY27	220 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	ACE2	Q9BYF1	805 aa	Predicted RBP	4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	CEP41	Q9BYV8	373 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	UNK	Q9C0B0	810 aa	Known RBP	4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	NIF3L1	Q9GZT8	377 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	POLR3F	Q9H1D9	316 aa	Predicted RBP	4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	AGO4	Q9HCK5	861 aa	Known RBP	4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	ANKEF1	Q9NU02	776 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	FBXO28	Q9NVF7	368 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	TMEM9	Q9P0T7	183 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	FBXO40	Q9UH90	709 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	ZDHHC2	Q9UIJ5	367 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	MID2	Q9UJV3	735 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	ERVK-11	Q9UQG0	969 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	B3GNT3	Q9Y2A9	372 aa		4.61	□□□□□ -1.67
PLS3-209	ENST00000539310	DHRS12	A0PJE2	317 aa		4.6	□□□□□ -1.67
PLS3-209	ENST00000539310		A6NL46	340 aa		4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	NOTO	A8MTQ0	251 aa		4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	TMEM233	B4DJY2	109 aa		4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	SLCO1B7	G3V0H7	640 aa		4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	TK2	O00142	265 aa		4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	EI24	O14681	340 aa		4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	MRAS	O14807	208 aa		4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	B4GAT1	O43505	415 aa		4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	DEAF1	O75398	565 aa	Predicted RBP	4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	MT-CO1	P00395	513 aa		4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	ASS1	P00966	412 aa	Known RBP	4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	CAPNS1	P04632	268 aa		4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	JUN	P05412	331 aa	Known RBP	4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	ALOX5	P09917	674 aa		4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	GPD1	P21695	349 aa		4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	MYF6	P23409	242 aa		4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	HPCAL1	P37235	193 aa		4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	ARL1	P40616	181 aa	Predicted RBP	4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	JAK3	P52333	1124 aa		4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	RPS3A	P61247	264 aa	Known RBP	4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	PPIL2	Q13356	520 aa		4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	FASTK	Q14296	549 aa	Known RBP	4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	INPP5A	Q14642	412 aa		4.6	□□□□□ -1.67
PLS3-209	ENST00000539310	MAPRE2	Q15555	327 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms