RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 PSME2Q9UL46 239 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 PCDHA1Q9Y5I3 950 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 HEY1Q9Y5J3 304 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 MYO18AQ92614 2054 aaKnown RBP6.81□□□□□ -1.32
USP28-207ENST00000538475 SIPA1L1O43166 1804 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 ZFC3H1O60293 1989 aaKnown RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 MN1Q10571 1320 aaPredicted RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 TMEM238LA0A1B0GVL6 79 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 TCRBV5S1A1TA0A578 114 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 TCRBV3S1A0A5B6 114 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 FAM172BPA6NC97 362 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 C2orf71A6NGG8 1288 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 SAC3D1A6NKF1 404 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 MEI4A8MW99 385 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 K7ENM7 598 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 MEIS1O00470 390 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 HTRA2O43464 458 aaPredicted RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 AKAP10O43572 662 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 ALDH1A2O94788 518 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 IFNB1P01574 187 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 ZSCAN5DPP0CG00 497 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 MLNP12872 115 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 CD58P19256 250 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 MMP8P22894 467 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 ITPKAP23677 461 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 NFKBIAP25963 317 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 MAOBP27338 520 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 POLR2BP30876 1174 aaKnown RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 HOXA10P31260 410 aaPredicted RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 CDH5P33151 784 aaPredicted RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 HADHAP40939 763 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 GARSP41250 739 aaKnown RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 MAGEA3P43357 314 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 NDST2P52849 883 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 AP3M2P53677 418 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 CDKL1Q00532 357 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 OTUD4Q01804 1114 aaKnown RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 STX5Q13190 355 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 EFTUD2Q15029 972 aaKnown RBP eCLIP6.8□□□□□ -1.32
USP28-207ENST00000538475 PDK1Q15118 436 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 POU4F3Q15319 338 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 CYTH1Q15438 398 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 SNRNP35Q16560 246 aaKnown RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 QRICH1Q2TAL8 776 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 TCHHL1Q5QJ38 904 aaPredicted RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 ZNF362Q5T0B9 420 aaPredicted RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 STEAP4Q687X5 459 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 ANKRD26P1Q6NSI1 321 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 TTC33Q6PID6 262 aaPredicted RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 ABRAXAS1Q6UWZ7 409 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 B3GNT9Q6UX72 402 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 CDHR3Q6ZTQ4 885 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 FASTKD5Q7L8L6 764 aaKnown RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 TFAP2DQ7Z6R9 452 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 DCP2Q8IU60 420 aaKnown RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 CTAGE3PQ8IX95 158 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 FAM20CQ8IXL6 584 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 LILRA2Q8N149 483 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 PPM1NQ8N819 430 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 GLIS1Q8NBF1 620 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 PIK3C3Q8NEB9 887 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 BEST2Q8NFU1 509 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 ANGPTL6Q8NI99 470 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 ACTL9Q8TC94 416 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 TRIB2Q92519 343 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 USP6NLQ92738 828 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 CELF1Q92879 486 aaKnown RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 ISL2Q96A47 359 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 TAMM41Q96BW9 452 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 CCDC124Q96CT7 223 aaKnown RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 TMA16Q96EY4 203 aaKnown RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 MED30Q96HR3 178 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 SLC45A3Q96JT2 553 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 CDRT15Q96T59 188 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 KLF6Q99612 283 aaPredicted RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 PKP2Q99959 881 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 EBF4Q9BQW3 602 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 SH2D3AQ9BRG2 576 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 WDR83Q9BRX9 315 aaKnown RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 TMEM121Q9BTD3 319 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 C9orf16Q9BUW7 83 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 NPLQ9BXD5 320 aaPredicted RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 TMPRSS13Q9BYE2 586 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 TRIM15Q9C019 465 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 UPF3AQ9H1J1 476 aaKnown RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 CPVLQ9H3G5 476 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 MUC13Q9H3R2 512 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 COPS7BQ9H9Q2 264 aaPredicted RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 SLC38A10Q9HBR0 1119 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 DIABLOQ9NR28 239 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 MAN1C1Q9NR34 630 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 THG1LQ9NWX6 298 aaKnown RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 NYAP2Q9P242 653 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 ZC3H7BQ9UGR2 993 aaKnown RBP6.8□□□□□ -1.32
USP28-207ENST00000538475 CPQQ9Y646 472 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 TRIP11Q15643 1979 aa6.8□□□□□ -1.32
USP28-207ENST00000538475 SMCHD1A6NHR9 2005 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 ADGRA2Q96PE1 1338 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 IGLV3-22A0A075B6J6 115 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 C3orf70A6NLC5 250 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms