RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 SPANXN3Q5MJ09 141 aa11.95□□□□□ -0.5
POLR1B-216ENST00000537335 VWA5B1Q5TIE3 1220 aa11.95□□□□□ -0.5
POLR1B-216ENST00000537335 VANGL1Q8TAA9 524 aaPredicted RBP11.95□□□□□ -0.5
POLR1B-216ENST00000537335 LPGAT1Q92604 370 aa11.95□□□□□ -0.5
POLR1B-216ENST00000537335 VMP1Q96GC9 406 aa11.95□□□□□ -0.5
POLR1B-216ENST00000537335 C7orf26Q96N11 449 aa11.95□□□□□ -0.5
POLR1B-216ENST00000537335 CORO1BQ9BR76 489 aa11.95□□□□□ -0.5
POLR1B-216ENST00000537335 PI4K2AQ9BTU6 479 aa11.95□□□□□ -0.5
POLR1B-216ENST00000537335 YTHDF1Q9BYJ9 559 aaKnown RBP11.95□□□□□ -0.5
POLR1B-216ENST00000537335 RACGAP1Q9H0H5 632 aa11.95□□□□□ -0.5
POLR1B-216ENST00000537335 DHX33Q9H6R0 707 aaKnown RBP11.95□□□□□ -0.5
POLR1B-216ENST00000537335 COQ10BQ9H8M1 238 aa11.95□□□□□ -0.5
POLR1B-216ENST00000537335 INTS10Q9NVR2 710 aaKnown RBP11.95□□□□□ -0.5
POLR1B-216ENST00000537335 FANCAO15360 1455 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 DENND4BO75064 1496 aaPredicted RBP11.94□□□□□ -0.5
POLR1B-216ENST00000537335 TPP1O14773 563 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 TFPTP0C1Z6 253 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 VARSP26640 1264 aaKnown RBP11.94□□□□□ -0.5
POLR1B-216ENST00000537335 ACOT2P49753 483 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 CTC1Q2NKJ3 1217 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 SNAP47Q5SQN1 464 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 MCOLN3Q8TDD5 553 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 C1GALT1C1Q96EU7 318 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 HOPXQ9BPY8 73 aaPredicted RBP11.94□□□□□ -0.5
POLR1B-216ENST00000537335 POMKQ9H5K3 350 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 LIN28AQ9H9Z2 209 aaKnown RBP11.94□□□□□ -0.5
POLR1B-216ENST00000537335 SLC35C2Q9NQQ7 365 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 VANGL2Q9ULK5 521 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 IFRD1O00458 451 aaPredicted RBP11.94□□□□□ -0.5
POLR1B-216ENST00000537335 GABRB2P47870 512 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 C11orf91Q3C1V1 193 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 DCAF4L1Q3SXM0 396 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 USP43Q70EL4 1123 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 ZNF655Q8N720 491 aaPredicted RBP11.94□□□□□ -0.5
POLR1B-216ENST00000537335 FAM167AQ96KS9 214 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 PHOX2BQ99453 314 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 PFDN5Q99471 154 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 NIF3L1Q9GZT8 377 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 PCDH10Q9P2E7 1040 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 SLC17A7Q9P2U7 560 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 ERI2A8K979 691 aaKnown RBP11.94□□□□□ -0.5
POLR1B-216ENST00000537335 K7EPI3 171 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 BCKDKO14874 412 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 ZBTB24O43167 697 aaPredicted RBP11.94□□□□□ -0.5
POLR1B-216ENST00000537335 PGLSO95336 258 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 RPL35P42766 123 aaKnown RBP11.94□□□□□ -0.5
POLR1B-216ENST00000537335 RAB2AP61019 212 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 CCNA1P78396 465 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 SLC18A2Q05940 514 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 TTLL9Q3SXZ7 439 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 C12orf50Q8NA57 414 aaPredicted RBP11.94□□□□□ -0.5
POLR1B-216ENST00000537335 GMCL1Q96IK5 515 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 CAMKK2Q96RR4 588 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 POP1Q99575 1024 aaKnown RBP11.94□□□□□ -0.5
POLR1B-216ENST00000537335 DUSP9Q99956 384 aaKnown RBP11.94□□□□□ -0.5
POLR1B-216ENST00000537335 HEPHQ9BQS7 1158 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 SAMHD1Q9Y3Z3 626 aaKnown RBP11.94□□□□□ -0.5
POLR1B-216ENST00000537335 WDR27A2RRH5 827 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 TRAFD1O14545 582 aaPredicted RBP11.94□□□□□ -0.5
POLR1B-216ENST00000537335 AP2A2O94973 939 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 APOC1P02654 83 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 GNAO1P09471 354 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 PSKH1P11801 424 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 FGFR2P21802 821 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 CYP4F8P98187 520 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 SLC1A5Q15758 541 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 C1orf189Q5VU69 101 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 UBE2J2Q8N2K1 259 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 RBM4BQ9BQ04 359 aaKnown RBP11.94□□□□□ -0.5
POLR1B-216ENST00000537335 RBM4Q9BWF3 364 aaKnown RBP11.94□□□□□ -0.5
POLR1B-216ENST00000537335 SENP6Q9GZR1 1112 aaPredicted RBP11.94□□□□□ -0.5
POLR1B-216ENST00000537335 TRIT1Q9H3H1 467 aaKnown RBP11.94□□□□□ -0.5
POLR1B-216ENST00000537335 XPNPEP3Q9NQH7 507 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 FARSBQ9NSD9 589 aaKnown RBP11.94□□□□□ -0.5
POLR1B-216ENST00000537335 MAGEL2Q9UJ55 1249 aa11.94□□□□□ -0.5
POLR1B-216ENST00000537335 A0A1W2PPW3 197 aa11.93□□□□□ -0.5
POLR1B-216ENST00000537335 FABP12A6NFH5 140 aa11.93□□□□□ -0.5
POLR1B-216ENST00000537335 EFCAB9A8MZ26 197 aa11.93□□□□□ -0.5
POLR1B-216ENST00000537335 MID1O15344 667 aa11.93□□□□□ -0.5
POLR1B-216ENST00000537335 PPM1BO75688 479 aa11.93□□□□□ -0.5
POLR1B-216ENST00000537335 PRDX6P30041 224 aa11.93□□□□□ -0.5
POLR1B-216ENST00000537335 S100A3P33764 101 aa11.93□□□□□ -0.5
POLR1B-216ENST00000537335 ENDOVQ8N8Q3 282 aaKnown RBP11.93□□□□□ -0.5
POLR1B-216ENST00000537335 PJA1Q8NG27 643 aa11.93□□□□□ -0.5
POLR1B-216ENST00000537335 LRTOMTQ8WZ04 291 aa11.93□□□□□ -0.5
POLR1B-216ENST00000537335 SEC14L1Q92503 715 aa11.93□□□□□ -0.5
POLR1B-216ENST00000537335 NPAS2Q99743 824 aa11.93□□□□□ -0.5
POLR1B-216ENST00000537335 ZNF518BQ9C0D4 1074 aa11.93□□□□□ -0.5
POLR1B-216ENST00000537335 DCP1AQ9NPI6 582 aaPredicted RBP11.93□□□□□ -0.5
POLR1B-216ENST00000537335 HPF1Q9NWY4 346 aa11.93□□□□□ -0.5
POLR1B-216ENST00000537335 SNTG2Q9NY99 539 aa11.93□□□□□ -0.5
POLR1B-216ENST00000537335 IFNGR2P38484 337 aa11.93□□□□□ -0.5
POLR1B-216ENST00000537335 CDH4P55283 916 aa11.93□□□□□ -0.5
POLR1B-216ENST00000537335 TGFBIQ15582 683 aa11.93□□□□□ -0.5
POLR1B-216ENST00000537335 QRICH1Q2TAL8 776 aa11.93□□□□□ -0.5
POLR1B-216ENST00000537335 WSCD2Q2TBF2 565 aa11.93□□□□□ -0.5
POLR1B-216ENST00000537335 BTBD8Q5XKL5 378 aa11.93□□□□□ -0.5
POLR1B-216ENST00000537335 ULK3Q6PHR2 472 aa11.93□□□□□ -0.5
POLR1B-216ENST00000537335 KCNMB4Q86W47 210 aa11.93□□□□□ -0.5
POLR1B-216ENST00000537335 FBXO39Q8N4B4 442 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms