RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 SYN3O14994 580 aa5.33□□□□□ -1.56
CCDC7-208ENST00000537047 XPNPEP2O43895 674 aa5.33□□□□□ -1.56
CCDC7-208ENST00000537047 RHBDF2Q6PJF5 856 aa5.33□□□□□ -1.56
CCDC7-208ENST00000537047 DSTYKQ6XUX3 929 aa5.33□□□□□ -1.56
CCDC7-208ENST00000537047 POC1AQ8NBT0 407 aa5.33□□□□□ -1.56
CCDC7-208ENST00000537047 RSC1A1Q92681 617 aa5.33□□□□□ -1.56
CCDC7-208ENST00000537047 CADM1Q9BY67 442 aaKnown RBP5.33□□□□□ -1.56
CCDC7-208ENST00000537047 ELAC1Q9H777 363 aaKnown RBP5.33□□□□□ -1.56
CCDC7-208ENST00000537047 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.32□□□□□ -1.56
CCDC7-208ENST00000537047 CYP4A11Q02928 519 aa5.32□□□□□ -1.56
CCDC7-208ENST00000537047 DLG1Q12959 904 aa5.32□□□□□ -1.56
CCDC7-208ENST00000537047 DHX34Q14147 1143 aaKnown RBP5.32□□□□□ -1.56
CCDC7-208ENST00000537047 STARD3Q14849 445 aa5.32□□□□□ -1.56
CCDC7-208ENST00000537047 TBRG1Q3YBR2 411 aa5.32□□□□□ -1.56
CCDC7-208ENST00000537047 SETMARQ53H47 684 aaPredicted RBP5.32□□□□□ -1.56
CCDC7-208ENST00000537047 XKR9Q5GH70 373 aa5.32□□□□□ -1.56
CCDC7-208ENST00000537047 TTC22Q5TAA0 569 aa5.32□□□□□ -1.56
CCDC7-208ENST00000537047 STPG1Q5TH74 334 aa5.32□□□□□ -1.56
CCDC7-208ENST00000537047 TMEM268Q5VZI3 342 aa5.32□□□□□ -1.56
CCDC7-208ENST00000537047 KRTAP5-4Q6L8H1 288 aa5.32□□□□□ -1.56
CCDC7-208ENST00000537047 NFRKBQ6P4R8 1299 aa5.32□□□□□ -1.56
CCDC7-208ENST00000537047 BRSK2Q8IWQ3 736 aa5.32□□□□□ -1.56
CCDC7-208ENST00000537047 RBFAQ8N0V3 343 aa5.32□□□□□ -1.56
CCDC7-208ENST00000537047 DEPTORQ8TB45 409 aa5.32□□□□□ -1.56
CCDC7-208ENST00000537047 NEK9Q8TD19 979 aa5.32□□□□□ -1.56
CCDC7-208ENST00000537047 ATOH1Q92858 354 aaPredicted RBP5.32□□□□□ -1.56
CCDC7-208ENST00000537047 C8orf48Q96LL4 319 aa5.32□□□□□ -1.56
CCDC7-208ENST00000537047 PIGSQ96S52 555 aa5.32□□□□□ -1.56
CCDC7-208ENST00000537047 CXorf56Q9H5V9 222 aa5.32□□□□□ -1.56
CCDC7-208ENST00000537047 A0A1B0GVM2 712 aa5.31□□□□□ -1.56
CCDC7-208ENST00000537047 J3KR12 359 aa5.31□□□□□ -1.56
CCDC7-208ENST00000537047 CHN1P15882 459 aa5.31□□□□□ -1.56
CCDC7-208ENST00000537047 PDCLQ13371 301 aa5.31□□□□□ -1.56
CCDC7-208ENST00000537047 DCTN1Q14203 1278 aa5.31□□□□□ -1.56
CCDC7-208ENST00000537047 RPS6KA2Q15349 733 aa5.31□□□□□ -1.56
CCDC7-208ENST00000537047 EFHC1Q5JVL4 640 aa5.31□□□□□ -1.56
CCDC7-208ENST00000537047 ATPAF1Q5TC12 328 aaPredicted RBP5.31□□□□□ -1.56
CCDC7-208ENST00000537047 SRLQ86TD4 932 aa5.31□□□□□ -1.56
CCDC7-208ENST00000537047 SCMH1Q96GD3 660 aa5.31□□□□□ -1.56
CCDC7-208ENST00000537047 HES6Q96HZ4 224 aa5.31□□□□□ -1.56
CCDC7-208ENST00000537047 MYD88Q99836 296 aa5.31□□□□□ -1.56
CCDC7-208ENST00000537047 KATNAL1Q9BW62 490 aa5.31□□□□□ -1.56
CCDC7-208ENST00000537047 KRTAP4-4Q9BYR3 166 aa5.31□□□□□ -1.56
CCDC7-208ENST00000537047 EFCAB8A8MWE9 144 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 CLGNO14967 610 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 ACTL6BO94805 426 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 PAK4O96013 591 aaPredicted RBP5.3□□□□□ -1.56
CCDC7-208ENST00000537047 CYP4B1P13584 511 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 ACP5P13686 325 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 ARSAP15289 507 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 SSTR2P30874 369 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 DCTDP32321 178 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 PPM1AP35813 382 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 CDK7P50613 346 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 HDAC1Q13547 482 aaPredicted RBP5.3□□□□□ -1.56
CCDC7-208ENST00000537047 PTK2BQ14289 1009 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 LIN54Q6MZP7 749 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 C9orf139Q6ZV77 190 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 RRAGAQ7L523 313 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 C11orf96Q7Z7L8 435 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 GALNT7Q86SF2 657 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 SORCS1Q8WY21 1168 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 TMEM41AQ96HV5 264 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 HERC2P3Q9BVR0 1158 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 CHPF2Q9P2E5 772 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 NLKQ9UBE8 527 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 KCND3Q9UK17 655 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 SLC45A1Q9Y2W3 748 aa5.3□□□□□ -1.56
CCDC7-208ENST00000537047 A0A0U1RQJ8 604 aa5.29□□□□□ -1.56
CCDC7-208ENST00000537047 TMEM247A6NEH6 219 aa5.29□□□□□ -1.56
CCDC7-208ENST00000537047 MMP3P08254 477 aa5.29□□□□□ -1.56
CCDC7-208ENST00000537047 NBPF7P0C2Y1 421 aaPredicted RBP5.29□□□□□ -1.56
CCDC7-208ENST00000537047 SERPINA4P29622 427 aa5.29□□□□□ -1.56
CCDC7-208ENST00000537047 SLC44A2Q8IWA5 706 aaPredicted RBP5.29□□□□□ -1.56
CCDC7-208ENST00000537047 RFWD2Q8NHY2 731 aa5.29□□□□□ -1.56
CCDC7-208ENST00000537047 BICD1Q96G01 975 aa5.29□□□□□ -1.56
CCDC7-208ENST00000537047 PABPC3Q9H361 631 aaKnown RBP5.29□□□□□ -1.56
CCDC7-208ENST00000537047 MVB12BQ9H7P6 319 aa5.29□□□□□ -1.56
CCDC7-208ENST00000537047 PRDM8Q9NQV8 689 aa5.29□□□□□ -1.56
CCDC7-208ENST00000537047 MAGEA13PA6NCF6 341 aa5.28□□□□□ -1.56
CCDC7-208ENST00000537047 CBX6O95503 412 aa5.28□□□□□ -1.56
CCDC7-208ENST00000537047 AMD1P17707 334 aa5.28□□□□□ -1.56
CCDC7-208ENST00000537047 TECP42680 631 aa5.28□□□□□ -1.56
CCDC7-208ENST00000537047 PTPN9P43378 593 aa5.28□□□□□ -1.56
CCDC7-208ENST00000537047 GALNT1Q10472 559 aaPredicted RBP5.28□□□□□ -1.56
CCDC7-208ENST00000537047 CEP85LQ5SZL2 805 aa5.28□□□□□ -1.56
CCDC7-208ENST00000537047 DGAT2L7PQ6IED9 249 aa5.28□□□□□ -1.56
CCDC7-208ENST00000537047 RAB11FIP2Q7L804 512 aa5.28□□□□□ -1.56
CCDC7-208ENST00000537047 DCUN1D3Q8IWE4 304 aa5.28□□□□□ -1.56
CCDC7-208ENST00000537047 NAGSQ8N159 534 aa5.28□□□□□ -1.56
CCDC7-208ENST00000537047 C3orf49Q96BT1 292 aa5.28□□□□□ -1.56
CCDC7-208ENST00000537047 TEFMQ96QE5 360 aaKnown RBP5.28□□□□□ -1.56
CCDC7-208ENST00000537047 WDR6Q9NNW5 1121 aaKnown RBP5.28□□□□□ -1.56
CCDC7-208ENST00000537047 TMEM51Q9NW97 253 aa5.28□□□□□ -1.56
CCDC7-208ENST00000537047 C19orf53Q9UNZ5 99 aaPredicted RBP5.28□□□□□ -1.56
CCDC7-208ENST00000537047 GOLGA6L3A6NEY3 463 aa5.27□□□□□ -1.57
CCDC7-208ENST00000537047 FAM90A20PA6NIJ5 464 aa5.27□□□□□ -1.57
CCDC7-208ENST00000537047 GNALP38405 381 aa5.27□□□□□ -1.57
CCDC7-208ENST00000537047 AP2B1P63010 937 aa5.27□□□□□ -1.57
CCDC7-208ENST00000537047 ADORA2A-AS1P86434 159 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms