RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 WDR17Q8IZU2 1322 aa5.74□□□□□ -1.49
PRKDC-208ENST00000536710 TTC36A6NLP5 189 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 LINC01548A6NM66 108 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 EIF3CLB5ME19 914 aaKnown RBP5.73□□□□□ -1.49
PRKDC-208ENST00000536710 PROP1O75360 226 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 NEURL1O76050 574 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 TMCC1O94876 653 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 ALOX12P18054 663 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 YWHAQP27348 245 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 CPOXP36551 454 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 ACVRL1P37023 503 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 PPARGP37231 505 aaPredicted RBP5.73□□□□□ -1.49
PRKDC-208ENST00000536710 CLCNKBP51801 687 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 ELLP55199 621 aaPredicted RBP5.73□□□□□ -1.49
PRKDC-208ENST00000536710 CCNG2Q16589 344 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 GSTA3Q16772 222 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 EARS2Q5JPH6 523 aaKnown RBP5.73□□□□□ -1.49
PRKDC-208ENST00000536710 LCE3BQ5TA77 95 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 FBXO42Q6P3S6 717 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 AAGABQ6PD74 315 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 FAM57BQ71RH2 274 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 DPP10Q8N608 796 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 SEMA6DQ8NFY4 1073 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 HASPINQ8TF76 798 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 ATOH1Q92858 354 aaPredicted RBP5.73□□□□□ -1.49
PRKDC-208ENST00000536710 FAM118BQ9BPY3 351 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 PIMREGQ9BSJ6 248 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 ZNF70Q9UC06 446 aaPredicted RBP5.73□□□□□ -1.49
PRKDC-208ENST00000536710 TBC1D29Q9UFV1 150 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 MKLN1Q9UL63 735 aa5.73□□□□□ -1.49
PRKDC-208ENST00000536710 A0A1W2PQM1 296 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 DDTLA6NHG4 134 aaPredicted RBP5.72□□□□□ -1.49
PRKDC-208ENST00000536710 LRRC53A6NM62 1247 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 PTGES3LE9PB15 166 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 KIF1CO43896 1103 aaKnown RBP5.72□□□□□ -1.49
PRKDC-208ENST00000536710 NUDT3O95989 172 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 LCKP06239 509 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 PBX3P40426 434 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 DPP6P42658 865 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 OLR1P78380 273 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 GHRHRQ02643 423 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 RUNX2Q13950 521 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 PPP2R5BQ15173 497 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 SYTL3Q4VX76 610 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 RILPL1Q5EBL4 403 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 ATG9BQ674R7 924 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 TICAM2Q86XR7 235 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 LURAP1LQ8IV03 231 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 CNGA4Q8IV77 575 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 TTC39CQ8N584 583 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 FRMD1Q8N878 549 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 RASSF8Q8NHQ8 419 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 BCAS4Q8TDM0 211 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 CREB3L4Q8TEY5 395 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 INTS12Q96CB8 462 aaKnown RBP5.72□□□□□ -1.49
PRKDC-208ENST00000536710 PERPQ96FX8 193 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 AGAP2Q99490 1192 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 SH2D3AQ9BRG2 576 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 SCAND2PQ9GZW5 306 aaPredicted RBP5.72□□□□□ -1.49
PRKDC-208ENST00000536710 CCDC68Q9H2F9 335 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 IKZF4Q9H2S9 585 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 SYNCQ9H7C4 482 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 PRKRIP1Q9H875 184 aaPredicted RBP5.72□□□□□ -1.49
PRKDC-208ENST00000536710 NSMCE4AQ9NXX6 385 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 EHD2Q9NZN4 543 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 ADD3Q9UEY8 706 aaKnown RBP5.72□□□□□ -1.49
PRKDC-208ENST00000536710 RAP2CQ9Y3L5 183 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 LYVE1Q9Y5Y7 322 aa5.72□□□□□ -1.49
PRKDC-208ENST00000536710 FNDC1Q4ZHG4 1894 aaPredicted RBP5.72□□□□□ -1.49
PRKDC-208ENST00000536710 FAM237BA0A1B0GVD1 139 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 FOXO6A8MYZ6 492 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 FAM157AC9JC47 383 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 F8W810 466 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 SEC31AO94979 1220 aaKnown RBP5.71□□□□□ -1.5
PRKDC-208ENST00000536710 MLYCDO95822 493 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 PRKCGP05129 697 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 IRF1P10914 325 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 MPGP29372 298 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 HOXD13P35453 343 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 GNAQP50148 359 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 EFNA5P52803 228 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 TGFB2P61812 414 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 SLC10A2Q12908 348 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-208ENST00000536710 ENTPD8Q5MY95 495 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 ISM2Q6H9L7 571 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 PCSK4Q6UW60 755 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 ZNF793Q6ZN11 406 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 ZNF788Q6ZQV5 615 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 DDIASQ8IXT1 998 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 KIAA2013Q8IYS2 634 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 LRRC57Q8N9N7 239 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 HDAC7Q8WUI4 952 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 BBS4Q96RK4 519 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 PCED1AQ9H1Q7 454 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 MUC13Q9H3R2 512 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 PAPOLBQ9NRJ5 636 aaKnown RBP5.71□□□□□ -1.5
PRKDC-208ENST00000536710 TMEM45AQ9NWC5 275 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 HCFC1R1Q9NWW0 138 aa5.71□□□□□ -1.5
PRKDC-208ENST00000536710 PLEKHB1Q9UF11 243 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-208ENST00000536710 MST1RQ04912 1400 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms