RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 HCAR3P49019 387 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 TUBB3Q13509 450 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 SEMA3AQ14563 771 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 ZNF267Q14586 743 aaPredicted RBP3.78□□□□□ -1.8
MCF2-210ENST00000536274 SEC23AQ15436 765 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 TBC1D10BQ4KMP7 808 aaPredicted RBP3.78□□□□□ -1.8
MCF2-210ENST00000536274 BOLA3Q53S33 107 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 CAVIN4Q5BKX8 364 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 ATF7IP2Q5U623 682 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 SHEQ5VZ18 495 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 TUBA3EQ6PEY2 450 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 ZNF600Q6ZNG1 722 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 PLEKHG7Q6ZR37 379 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 DGLUCYQ7Z3D6 616 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 ADGRA1Q86SQ6 560 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 CARM1Q86X55 608 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 CCDC103Q8IW40 242 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 VPS37AQ8NEZ2 397 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 PPP1R14CQ8TAE6 165 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 ANKRD49Q8WVL7 239 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 SCFD1Q8WVM8 642 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 LARP4BQ92615 738 aaKnown RBP3.78□□□□□ -1.8
MCF2-210ENST00000536274 PPWD1Q96BP3 646 aaKnown RBP3.78□□□□□ -1.8
MCF2-210ENST00000536274 TMA16Q96EY4 203 aaKnown RBP3.78□□□□□ -1.8
MCF2-210ENST00000536274 CEP95Q96GE4 821 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 TOE1Q96GM8 510 aaKnown RBP3.78□□□□□ -1.8
MCF2-210ENST00000536274 HSFY1Q96LI6 401 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 ZNF641Q96N77 438 aaPredicted RBP3.78□□□□□ -1.8
MCF2-210ENST00000536274 TSNARE1Q96NA8 513 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 NACC1Q96RE7 527 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 OLFM1Q99784 485 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 TM9SF2Q99805 663 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 SEC22CQ9BRL7 303 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 MRIQ9BWK5 157 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 TUFT1Q9NNX1 390 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 MRPL40Q9NQ50 206 aaKnown RBP3.78□□□□□ -1.8
MCF2-210ENST00000536274 SLC17A6Q9P2U8 582 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 PSMC3IPQ9P2W1 217 aaPredicted RBP3.78□□□□□ -1.8
MCF2-210ENST00000536274 WARS2Q9UGM6 360 aaKnown RBP3.78□□□□□ -1.8
MCF2-210ENST00000536274 FBXO40Q9UH90 709 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 ATPIF1Q9UII2 106 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 SNX8Q9Y5X2 465 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 ACTL7BQ9Y614 415 aa3.78□□□□□ -1.8
MCF2-210ENST00000536274 WTIPA6NIX2 430 aaPredicted RBP3.78□□□□□ -1.81
MCF2-210ENST00000536274 LRRC72A6NJI9 287 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 I3L4J1 428 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 MEIS1O00470 390 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 AKR7A2O43488 359 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 TCEA3O75764 348 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 S1PR4O95977 384 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 CYP2C8P10632 490 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 HDCP19113 662 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 GLRA2P23416 452 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 GNL1P36915 607 aaPredicted RBP3.78□□□□□ -1.81
MCF2-210ENST00000536274 ETV4P43268 484 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 CCR10P46092 362 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 SOX9P48436 509 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 WNT7BP56706 349 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 MYL6P60660 151 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 RPL10AP62906 217 aaKnown RBP3.78□□□□□ -1.81
MCF2-210ENST00000536274 XIAPP98170 497 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 TFAMQ00059 246 aaKnown RBP3.78□□□□□ -1.81
MCF2-210ENST00000536274 PRKCQQ04759 706 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 BFSP1Q12934 665 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 STX3Q13277 289 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 POU6F1Q14863 301 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 PCBP1Q15365 356 aaKnown RBP eCLIP3.78□□□□□ -1.81
MCF2-210ENST00000536274 INSCQ1MX18 579 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 SLC35G1Q2M3R5 365 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 CBWD6Q4V339 395 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 CBWD3Q5JTY5 395 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 KCNT1Q5JUK3 1230 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 HABP4Q5JVS0 413 aaKnown RBP3.78□□□□□ -1.81
MCF2-210ENST00000536274 SPDYAQ5MJ70 313 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 CBWD5Q5RIA9 395 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 C10orf62Q5T681 223 aaPredicted RBP3.78□□□□□ -1.81
MCF2-210ENST00000536274 FKBP1CQ5VVH2 108 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 HMBOX1Q6NT76 420 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 LDHAL6AQ6ZMR3 332 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 TXNRD3Q86VQ6 643 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 NLGN4XQ8N0W4 816 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 TCAIMQ8N3R3 496 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 LRRC71Q8N4P6 559 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 PCDH20Q8N6Y1 951 aaKnown RBP3.78□□□□□ -1.81
MCF2-210ENST00000536274 POC5Q8NA72 575 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 SLC22A8Q8TCC7 542 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 MZB1Q8WU39 189 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 PIK3R3Q92569 461 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 SNAPC3Q92966 411 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 FBXW5Q969U6 566 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 E2F7Q96AV8 911 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 VPS33AQ96AX1 596 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 SH3KBP1Q96B97 665 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 CDCA5Q96FF9 252 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 RADILQ96JH8 1075 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 CFAP57Q96MR6 1250 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 LENG8Q96PV6 779 aaPredicted RBP3.78□□□□□ -1.81
MCF2-210ENST00000536274 FYTTD1Q96QD9 318 aaKnown RBP3.78□□□□□ -1.81
MCF2-210ENST00000536274 PIP5K1AQ99755 562 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 AIFM2Q9BRQ8 373 aa3.78□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms