RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 UPP1Q16831 310 aa16.26■□□□□ 0.19
CHMP1A-202ENST00000535997 TIGD5Q53EQ6 642 aa16.26■□□□□ 0.19
CHMP1A-202ENST00000535997 CENPLQ8N0S6 344 aaPredicted RBP16.26■□□□□ 0.19
CHMP1A-202ENST00000535997 DQX1Q8TE96 717 aaKnown RBP16.26■□□□□ 0.19
CHMP1A-202ENST00000535997 ZNF483Q8TF39 744 aaPredicted RBP16.26■□□□□ 0.19
CHMP1A-202ENST00000535997 MYLPFQ96A32 169 aa16.26■□□□□ 0.19
CHMP1A-202ENST00000535997 IL12RB2Q99665 862 aa16.26■□□□□ 0.19
CHMP1A-202ENST00000535997 UBE2OQ9C0C9 1292 aaKnown RBP16.26■□□□□ 0.19
CHMP1A-202ENST00000535997 ARHGEF38Q9NXL2 777 aa16.26■□□□□ 0.19
CHMP1A-202ENST00000535997 ZDHHC2Q9UIJ5 367 aa16.26■□□□□ 0.19
CHMP1A-202ENST00000535997 VPS28Q9UK41 221 aa16.26■□□□□ 0.19
CHMP1A-202ENST00000535997 ENO4A6NNW6 628 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 DFFAO00273 331 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 VAPBO95292 243 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 IGLV3-25P01717 112 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 STMN1P16949 149 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 EPHA3P29320 983 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 ARCN1P48444 511 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 MRPS6P82932 125 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 MED21Q13503 144 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 CYLC2Q14093 348 aaPredicted RBP16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 PPP2R5DQ14738 602 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 DENND5AQ6IQ26 1287 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 ATPAF2Q8N5M1 289 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 GDPD5Q8WTR4 605 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 KCTD4Q8WVF5 259 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 EBF3Q9H4W6 596 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 GLOD4Q9HC38 313 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 ENTPD7Q9NQZ7 604 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 SCN4AP35499 1836 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 AIM2O14862 343 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 MATN3O15232 486 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 MT-CYBP00156 380 aaPredicted RBP16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 UQCRBP14927 111 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 RAG1P15918 1043 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 BDNFP23560 247 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 PPARGP37231 505 aaPredicted RBP16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 GLRBP48167 497 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 RPL26P61254 145 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 PURAQ00577 322 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 LRRC36Q1X8D7 754 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 LPCAT4Q643R3 524 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 ARHGAP12Q8IWW6 846 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 PHC3Q8NDX5 983 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 PPHLN1Q8NEY8 458 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 USP33Q8TEY7 942 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 MOCOSQ96EN8 888 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 GPR78Q96P69 363 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 RTP3Q9BQQ7 232 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 RHOBTB2Q9BYZ6 727 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 SIK2Q9H0K1 926 aa16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 MRM3Q9HC36 420 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 DMAP1Q9NPF5 467 aaPredicted RBP16.25■□□□□ 0.19
CHMP1A-202ENST00000535997 H3BNX3 289 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 FGF10O15520 208 aaPredicted RBP16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 DLX3O60479 287 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 MAFKO60675 156 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 ZCCHC18P0CG32 403 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 ODC1P11926 461 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 NUDT2P50583 147 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 GEMP55040 296 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 CTBP1Q13363 440 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 POU6F1Q14863 301 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 FSCN1Q16658 493 aaKnown RBP16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 SFT2D3Q587I9 215 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 BRMS1LQ5PSV4 323 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 SPRYD7Q5W111 196 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 LRRC8EQ6NSJ5 796 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 SNX32Q86XE0 403 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 DSELQ8IZU8 1212 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 LSMEM2Q8N112 164 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 HIPK4Q8NE63 616 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 DDX50Q9BQ39 737 aaKnown RBP16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 NUF2Q9BZD4 464 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 ZNF385DQ9H6B1 395 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 CATSPERBQ9H7T0 1116 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 PAPOLBQ9NRJ5 636 aaKnown RBP16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 BCAP29Q9UHQ4 241 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 NEU3Q9UQ49 428 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 CDYLQ9Y232 598 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 CCDC78A2IDD5 438 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 IQCA1LA6NCM1 817 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 CASTOR2A6NHX0 329 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 NEMP1O14524 444 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 VCLP18206 1134 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 HOXC13P31276 330 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 ADRA1AP35348 466 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 FKBP1BP68106 108 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 NAIF1Q69YI7 327 aaPredicted RBP16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 ESRP1Q6NXG1 681 aaKnown RBP16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 ARHGAP36Q6ZRI8 547 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 METTL23Q86XA0 190 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 SLC41A1Q8IVJ1 513 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 DENND6AQ8IWF6 608 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 EFCAB3Q8N7B9 438 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 IPMKQ8NFU5 416 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 LPPQ93052 612 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 GBP5Q96PP8 586 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 TUBGCP5Q96RT8 1024 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms