RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 FNBP1LQ5T0N5 605 aa23.28■■□□□ 1.32
RBFOX1-206ENST00000535565 KCTD11Q693B1 232 aa23.28■■□□□ 1.32
RBFOX1-206ENST00000535565 NAPEPLDQ6IQ20 393 aa23.28■■□□□ 1.32
RBFOX1-206ENST00000535565 LINGO4Q6UY18 593 aa23.28■■□□□ 1.32
RBFOX1-206ENST00000535565 KLHDC8BQ8IXV7 354 aa23.28■■□□□ 1.32
RBFOX1-206ENST00000535565 PGBD5Q8N414 524 aa23.28■■□□□ 1.32
RBFOX1-206ENST00000535565 SPATA22Q8NHS9 363 aa23.28■■□□□ 1.32
RBFOX1-206ENST00000535565 FGF14Q92915 247 aa23.28■■□□□ 1.32
RBFOX1-206ENST00000535565 IMP4Q96G21 291 aaKnown RBP23.28■■□□□ 1.32
RBFOX1-206ENST00000535565 OXNAD1Q96HP4 312 aaPredicted RBP23.28■■□□□ 1.32
RBFOX1-206ENST00000535565 CDX2Q99626 313 aaPredicted RBP23.28■■□□□ 1.32
RBFOX1-206ENST00000535565 MGME1Q9BQP7 344 aa23.28■■□□□ 1.32
RBFOX1-206ENST00000535565 ECT2Q9H8V3 914 aa23.28■■□□□ 1.32
RBFOX1-206ENST00000535565 VPS45Q9NRW7 570 aa23.28■■□□□ 1.32
RBFOX1-206ENST00000535565 UBP1Q9NZI7 540 aa23.28■■□□□ 1.32
RBFOX1-206ENST00000535565 INTS6Q9UL03 887 aaKnown RBP23.28■■□□□ 1.32
RBFOX1-206ENST00000535565 ACTL7AQ9Y615 435 aa23.28■■□□□ 1.32
RBFOX1-206ENST00000535565 SZT2Q5T011 3432 aa23.28■■□□□ 1.32
RBFOX1-206ENST00000535565 TMCC1O94876 653 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 MAGEA4P43358 317 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 SULT2A1Q06520 285 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 SLC20A2Q08357 652 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 SMAD4Q13485 552 aaKnown RBP23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 GRM2Q14416 872 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 BBS9Q3SYG4 887 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 FUT11Q495W5 492 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 ASTLQ6HA08 431 aaPredicted RBP23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 LRRC8BQ6P9F7 803 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 LINC00523Q86TU6 105 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 CAND1Q86VP6 1230 aaKnown RBP23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 ZBED8Q8IZ13 594 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 AHI1Q8N157 1196 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 TSEN2Q8NCE0 465 aaKnown RBP23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 PLA2G2FQ9BZM2 168 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 CDC42EP4Q9H3Q1 356 aaKnown RBP23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 FBXO10Q9UK96 956 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 KIAA1549LQ6ZVL6 1849 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 E7ESA3 106 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 MT-CYBP00156 380 aaPredicted RBP23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 FOSL2P15408 326 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 CES1P23141 567 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 HSD17B3P37058 310 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 DGKGP49619 791 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 SERPINH1P50454 418 aaKnown RBP23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 DSC2Q02487 901 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 CYTH1Q15438 398 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 ALG1LQ6GMV1 187 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 SEMA3CQ99985 751 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 TRMT61BQ9BVS5 477 aaKnown RBP23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 FSD1LQ9BXM9 530 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 PABPC3Q9H361 631 aaKnown RBP23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 VIPAS39Q9H9C1 493 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 HPS4Q9NQG7 708 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 SLC25A13Q9UJS0 675 aa23.27■■□□□ 1.32
RBFOX1-206ENST00000535565 GRXCR2A6NFK2 248 aa23.26■■□□□ 1.31
RBFOX1-206ENST00000535565 AP3B1O00203 1094 aa23.26■■□□□ 1.31
RBFOX1-206ENST00000535565 CD160O95971 181 aa23.26■■□□□ 1.31
RBFOX1-206ENST00000535565 CD86P42081 329 aa23.26■■□□□ 1.31
RBFOX1-206ENST00000535565 CBLBQ13191 982 aa23.26■■□□□ 1.31
RBFOX1-206ENST00000535565 RUNX3Q13761 415 aa23.26■■□□□ 1.31
RBFOX1-206ENST00000535565 ZNF534Q76KX8 674 aa23.26■■□□□ 1.31
RBFOX1-206ENST00000535565 Q7L0L9 218 aa23.26■■□□□ 1.31
RBFOX1-206ENST00000535565 IPMKQ8NFU5 416 aa23.26■■□□□ 1.31
RBFOX1-206ENST00000535565 TTC25Q96NG3 672 aa23.26■■□□□ 1.31
RBFOX1-206ENST00000535565 ACBD3Q9H3P7 528 aa23.26■■□□□ 1.31
RBFOX1-206ENST00000535565 SEMA4AQ9H3S1 761 aa23.26■■□□□ 1.31
RBFOX1-206ENST00000535565 MUSKO15146 869 aa23.25■■□□□ 1.31
RBFOX1-206ENST00000535565 ALOX15BO15296 676 aa23.25■■□□□ 1.31
RBFOX1-206ENST00000535565 POLR2EP19388 210 aaKnown RBP23.25■■□□□ 1.31
RBFOX1-206ENST00000535565 SP100P23497 879 aaPredicted RBP23.25■■□□□ 1.31
RBFOX1-206ENST00000535565 GDI1P31150 447 aa23.25■■□□□ 1.31
RBFOX1-206ENST00000535565 RHOAP61586 193 aa23.25■■□□□ 1.31
RBFOX1-206ENST00000535565 NIPAL4Q0D2K0 466 aa23.25■■□□□ 1.31
RBFOX1-206ENST00000535565 SPARCL1Q14515 664 aa23.25■■□□□ 1.31
RBFOX1-206ENST00000535565 MSS51Q4VC12 460 aa23.25■■□□□ 1.31
RBFOX1-206ENST00000535565 CFAP58Q5T655 872 aa23.25■■□□□ 1.31
RBFOX1-206ENST00000535565 KIAA0907Q7Z7F0 614 aaPredicted RBP23.25■■□□□ 1.31
RBFOX1-206ENST00000535565 ARRDC2Q8TBH0 407 aa23.25■■□□□ 1.31
RBFOX1-206ENST00000535565 WFIKKN2Q8TEU8 576 aa23.25■■□□□ 1.31
RBFOX1-206ENST00000535565 PYROXD1Q8WU10 500 aa23.25■■□□□ 1.31
RBFOX1-206ENST00000535565 LRRC39Q96DD0 335 aa23.25■■□□□ 1.31
RBFOX1-206ENST00000535565 COL4A3Q01955 1670 aa23.24■■□□□ 1.31
RBFOX1-206ENST00000535565 AVILO75366 819 aa23.24■■□□□ 1.31
RBFOX1-206ENST00000535565 TULP3O75386 442 aa23.24■■□□□ 1.31
RBFOX1-206ENST00000535565 PMPCBO75439 489 aa23.24■■□□□ 1.31
RBFOX1-206ENST00000535565 SERPINF2P08697 491 aa23.24■■□□□ 1.31
RBFOX1-206ENST00000535565 GRIA1P42261 906 aa23.24■■□□□ 1.31
RBFOX1-206ENST00000535565 MAGEA3P43357 314 aa23.24■■□□□ 1.31
RBFOX1-206ENST00000535565 MTM1Q13496 603 aa23.24■■□□□ 1.31
RBFOX1-206ENST00000535565 UAP1Q16222 522 aaPredicted RBP23.24■■□□□ 1.31
RBFOX1-206ENST00000535565 DENND2CQ68D51 928 aa23.24■■□□□ 1.31
RBFOX1-206ENST00000535565 PRPF39Q86UA1 669 aaKnown RBP23.24■■□□□ 1.31
RBFOX1-206ENST00000535565 ETFBKMTQ8IXQ9 262 aa23.24■■□□□ 1.31
RBFOX1-206ENST00000535565 DNAAF3Q8N9W5 541 aa23.24■■□□□ 1.31
RBFOX1-206ENST00000535565 ATP11CQ8NB49 1132 aa23.24■■□□□ 1.31
RBFOX1-206ENST00000535565 C9orf72Q96LT7 481 aa23.24■■□□□ 1.31
RBFOX1-206ENST00000535565 TBL1YQ9BQ87 522 aa23.24■■□□□ 1.31
RBFOX1-206ENST00000535565 SCUBE2Q9NQ36 999 aa23.24■■□□□ 1.31
RBFOX1-206ENST00000535565 SLC27A6Q9Y2P4 619 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms