RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 ZCCHC9Q8N567 271 aaKnown RBP18.38■□□□□ 0.53
SFSWAP-203ENST00000535236 HJURPQ8NCD3 748 aaPredicted RBP18.38■□□□□ 0.53
SFSWAP-203ENST00000535236 ATXN2LQ8WWM7 1075 aaKnown RBP18.38■□□□□ 0.53
SFSWAP-203ENST00000535236 NMD3Q96D46 503 aaKnown RBP18.38■□□□□ 0.53
SFSWAP-203ENST00000535236 CDRT15Q96T59 188 aa18.38■□□□□ 0.53
SFSWAP-203ENST00000535236 BCL2L14Q9BZR8 327 aa18.38■□□□□ 0.53
SFSWAP-203ENST00000535236 CXorf56Q9H5V9 222 aa18.38■□□□□ 0.53
SFSWAP-203ENST00000535236 DNAJC18Q9H819 358 aa18.38■□□□□ 0.53
SFSWAP-203ENST00000535236 STON1Q9Y6Q2 735 aa18.38■□□□□ 0.53
SFSWAP-203ENST00000535236 URADA6NGE7 173 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 SIGLEC16A6NMB1 481 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 DCXO43602 365 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 STX11O75558 287 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 IL1BP01584 269 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 SLC41A1Q8IVJ1 513 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 OR52L1Q8NGH7 329 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 ASZ1Q8WWH4 475 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 TM6SF2Q9BZW4 377 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 KLHL31Q9H511 634 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 FTH1P02794 183 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 WASHC2DQ5SRD0 308 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 LYPLAL1Q5VWZ2 237 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 METTL3Q86U44 580 aaKnown RBP18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 NEK6Q9HC98 313 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 SYNPO2Q9UMS6 1093 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 FRMPD1Q5SYB0 1578 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 QSOX1O00391 747 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 PCBP1Q15365 356 aaKnown RBP eCLIP18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 ZFP1Q6P2D0 407 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 MYLPFQ96A32 169 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 HSFY1Q96LI6 401 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 L1RE1Q9UN81 338 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 CHADO15335 359 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 GLRA2P23416 452 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 FAM46CQ5VWP2 391 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 ZNF671Q8TAW3 534 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 BPIFA1Q9NP55 256 aa18.37■□□□□ 0.53
SFSWAP-203ENST00000535236 BUD23O43709 281 aaKnown RBP18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 GSTM5P46439 218 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 TTPAP49638 278 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 ZNF75CPQ92670 426 aaPredicted RBP18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 SLC39A8Q9C0K1 460 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 FBXO6Q9NRD1 293 aaPredicted RBP18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 EPORP19235 508 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 LRPAP1P30533 357 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 EARS2Q5JPH6 523 aaKnown RBP18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 ZNF276Q8N554 614 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 ZSCAN18Q8TBC5 510 aaPredicted RBP18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 TEKT5Q96M29 485 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 SLC12A4Q9UP95 1085 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 PAX3P23760 479 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 PAGE2Q7Z2X7 111 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 KLHL23Q8NBE8 558 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 NRDE2Q9H7Z3 1164 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 MAGEC1O60732 1142 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 PSMD7P51665 324 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 EXOC3L1Q86VI1 746 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 ZFPM1Q8IX07 1006 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 ETNPPLQ8TBG4 499 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 FANCEQ9HB96 536 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 HES2Q9Y543 173 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 PCDHA11Q9Y5I1 949 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 TISP43B9A030 160 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 NTRK1P04629 796 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 CCDC166P0CW27 439 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 CCNB1P14635 433 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 ZNF143P52747 638 aaPredicted RBP18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 NEDD8Q15843 81 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 INO80DQ53TQ3 878 aaPredicted RBP18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 NPNTQ6UXI9 565 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 DHRSXQ8N5I4 330 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 MCCC1Q96RQ3 725 aaPredicted RBP18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 CHST7Q9NS84 486 aa18.36■□□□□ 0.53
SFSWAP-203ENST00000535236 MEGF6O75095 1541 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 FKTNO75072 461 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 KLHL24Q6TFL4 600 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 PTGR2Q8N8N7 351 aaPredicted RBP18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 PPP1R13LQ8WUF5 828 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 PTGES3LE9PB15 166 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 RECQL5O94762 991 aaPredicted RBP18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 IL6P05231 212 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 RGS1Q08116 209 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 MAP2K5Q13163 448 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 SLC25A24Q6NUK1 477 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 BHLHB9Q6PI77 547 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 FAM220AQ7Z4H9 259 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 VSIG10LQ86VR7 867 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 ADHFE1Q8IWW8 467 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 DUSP9Q99956 384 aaKnown RBP18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 POLR1BQ9H9Y6 1135 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 ZNF624Q9P2J8 865 aaPredicted RBP18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 ABCG1P45844 678 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 CLCN5P51795 746 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 CDK16Q00536 496 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 MTAPQ13126 283 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 GPAT3Q53EU6 434 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 TCEAL5Q5H9L2 206 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 C16orf46Q6P387 395 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 R3HCC1LQ7Z5L2 792 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms