RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 LHX3Q9UBR4 397 aa20.89■□□□□ 0.93
CHFR-209ENST00000535181 MYO15AQ9UKN7 3530 aa20.88■□□□□ 0.93
CHFR-209ENST00000535181 IGHV1OR15-9A0A0B4J2B8 117 aa20.88■□□□□ 0.93
CHFR-209ENST00000535181 TGM2P21980 687 aa20.88■□□□□ 0.93
CHFR-209ENST00000535181 CETN2P41208 172 aa20.88■□□□□ 0.93
CHFR-209ENST00000535181 CCNHP51946 323 aaPredicted RBP20.88■□□□□ 0.93
CHFR-209ENST00000535181 RHOAP61586 193 aa20.88■□□□□ 0.93
CHFR-209ENST00000535181 SLC10A2Q12908 348 aaPredicted RBP20.88■□□□□ 0.93
CHFR-209ENST00000535181 SLC36A4Q6YBV0 504 aa20.88■□□□□ 0.93
CHFR-209ENST00000535181 BZW1Q7L1Q6 419 aaKnown RBP20.88■□□□□ 0.93
CHFR-209ENST00000535181 KBTBD6Q86V97 674 aa20.88■□□□□ 0.93
CHFR-209ENST00000535181 FAM131CQ96AQ9 280 aa20.88■□□□□ 0.93
CHFR-209ENST00000535181 OLFM3Q96PB7 478 aa20.88■□□□□ 0.93
CHFR-209ENST00000535181 PSKH2Q96QS6 385 aa20.88■□□□□ 0.93
CHFR-209ENST00000535181 HEPHQ9BQS7 1158 aa20.88■□□□□ 0.93
CHFR-209ENST00000535181 TM6SF2Q9BZW4 377 aa20.88■□□□□ 0.93
CHFR-209ENST00000535181 FAM86C1Q9NVL1 165 aa20.88■□□□□ 0.93
CHFR-209ENST00000535181 SEPT3Q9UH03 358 aa20.88■□□□□ 0.93
CHFR-209ENST00000535181 IL36AQ9UHA7 158 aa20.88■□□□□ 0.93
CHFR-209ENST00000535181 WASF2Q9Y6W5 498 aa20.88■□□□□ 0.93
CHFR-209ENST00000535181 VPS13AQ96RL7 3174 aa20.88■□□□□ 0.93
CHFR-209ENST00000535181 DMDP11532 3685 aa20.87■□□□□ 0.93
CHFR-209ENST00000535181 CST8O60676 142 aa20.87■□□□□ 0.93
CHFR-209ENST00000535181 IGSF6O95976 241 aa20.87■□□□□ 0.93
CHFR-209ENST00000535181 IL1BP01584 269 aa20.87■□□□□ 0.93
CHFR-209ENST00000535181 CTSLP07711 333 aa20.87■□□□□ 0.93
CHFR-209ENST00000535181 KRT10P13645 584 aa20.87■□□□□ 0.93
CHFR-209ENST00000535181 CCNCP24863 283 aa20.87■□□□□ 0.93
CHFR-209ENST00000535181 SLC8A1P32418 973 aa20.87■□□□□ 0.93
CHFR-209ENST00000535181 HSPA9P38646 679 aaKnown RBP20.87■□□□□ 0.93
CHFR-209ENST00000535181 PSMD8P48556 350 aa20.87■□□□□ 0.93
CHFR-209ENST00000535181 CSNK1DP48730 415 aa20.87■□□□□ 0.93
CHFR-209ENST00000535181 NSUN2Q08J23 767 aaKnown RBP eCLIP20.87■□□□□ 0.93
CHFR-209ENST00000535181 SRSF5Q13243 272 aaKnown RBP20.87■□□□□ 0.93
CHFR-209ENST00000535181 SIM2Q14190 667 aaPredicted RBP20.87■□□□□ 0.93
CHFR-209ENST00000535181 LBRQ14739 615 aaKnown RBP20.87■□□□□ 0.93
CHFR-209ENST00000535181 SPDYCQ5MJ68 293 aa20.87■□□□□ 0.93
CHFR-209ENST00000535181 BBS12Q6ZW61 710 aa20.87■□□□□ 0.93
CHFR-209ENST00000535181 REXO1L1PQ8IX06 675 aa20.87■□□□□ 0.93
CHFR-209ENST00000535181 CHST14Q8NCH0 376 aa20.87■□□□□ 0.93
CHFR-209ENST00000535181 PIP4K2CQ8TBX8 421 aa20.87■□□□□ 0.93
CHFR-209ENST00000535181 NSMCE1Q8WV22 266 aa20.87■□□□□ 0.93
CHFR-209ENST00000535181 RLN3Q8WXF3 142 aa20.87■□□□□ 0.93
CHFR-209ENST00000535181 MAML1Q92585 1016 aa20.87■□□□□ 0.93
CHFR-209ENST00000535181 BRD8Q9H0E9 1235 aa20.87■□□□□ 0.93
CHFR-209ENST00000535181 HECAQ9UBI9 543 aaPredicted RBP20.87■□□□□ 0.93
CHFR-209ENST00000535181 FZD4Q9ULV1 537 aa20.87■□□□□ 0.93
CHFR-209ENST00000535181 PACSIN2Q9UNF0 486 aaPredicted RBP20.87■□□□□ 0.93
CHFR-209ENST00000535181 CYP8B1Q9UNU6 501 aa20.87■□□□□ 0.93
CHFR-209ENST00000535181 MID1O15344 667 aa20.86■□□□□ 0.93
CHFR-209ENST00000535181 BNIP3LO60238 219 aa20.86■□□□□ 0.93
CHFR-209ENST00000535181 POP4O95707 220 aaKnown RBP20.86■□□□□ 0.93
CHFR-209ENST00000535181 CD6P30203 668 aa20.86■□□□□ 0.93
CHFR-209ENST00000535181 DNA2P51530 1060 aa20.86■□□□□ 0.93
CHFR-209ENST00000535181 RENBPP51606 427 aa20.86■□□□□ 0.93
CHFR-209ENST00000535181 PPIDQ08752 370 aaKnown RBP20.86■□□□□ 0.93
CHFR-209ENST00000535181 SLC10A7Q0GE19 358 aa20.86■□□□□ 0.93
CHFR-209ENST00000535181 HNRNPDQ14103 355 aaKnown RBP20.86■□□□□ 0.93
CHFR-209ENST00000535181 PDK1Q15118 436 aa20.86■□□□□ 0.93
CHFR-209ENST00000535181 MYLK3Q32MK0 819 aa20.86■□□□□ 0.93
CHFR-209ENST00000535181 MEI1Q5TIA1 1274 aa20.86■□□□□ 0.93
CHFR-209ENST00000535181 KAZNQ674X7 775 aa20.86■□□□□ 0.93
CHFR-209ENST00000535181 CEP68Q76N32 757 aa20.86■□□□□ 0.93
CHFR-209ENST00000535181 CACUL1Q86Y37 369 aa20.86■□□□□ 0.93
CHFR-209ENST00000535181 BBS5Q8N3I7 341 aa20.86■□□□□ 0.93
CHFR-209ENST00000535181 TEX26Q8N6G2 289 aa20.86■□□□□ 0.93
CHFR-209ENST00000535181 VOPP1Q96AW1 172 aa20.86■□□□□ 0.93
CHFR-209ENST00000535181 CINPQ9BW66 212 aaPredicted RBP20.86■□□□□ 0.93
CHFR-209ENST00000535181 OSBPL1AQ9BXW6 950 aa20.86■□□□□ 0.93
CHFR-209ENST00000535181 OSBPL8Q9BZF1 889 aa20.86■□□□□ 0.93
CHFR-209ENST00000535181 CD93Q9NPY3 652 aa20.86■□□□□ 0.93
CHFR-209ENST00000535181 WSB2Q9NYS7 404 aaPredicted RBP20.86■□□□□ 0.93
CHFR-209ENST00000535181 AMACRQ9UHK6 382 aa20.86■□□□□ 0.93
CHFR-209ENST00000535181 MBD1Q9UIS9 605 aaPredicted RBP20.86■□□□□ 0.93
CHFR-209ENST00000535181 SARDHQ9UL12 918 aa20.86■□□□□ 0.93
CHFR-209ENST00000535181 NCKAP1Q9Y2A7 1128 aa20.86■□□□□ 0.93
CHFR-209ENST00000535181 HEY1Q9Y5J3 304 aa20.86■□□□□ 0.93
CHFR-209ENST00000535181 SPAG17Q6Q759 2223 aa20.85■□□□□ 0.93
CHFR-209ENST00000535181 SHROOM3Q8TF72 1996 aa20.85■□□□□ 0.93
CHFR-209ENST00000535181 PPP1R12AO14974 1030 aaPredicted RBP20.85■□□□□ 0.93
CHFR-209ENST00000535181 MATN3O15232 486 aa20.85■□□□□ 0.93
CHFR-209ENST00000535181 SLC7A4O43246 635 aa20.85■□□□□ 0.93
CHFR-209ENST00000535181 PYGMP11217 842 aa20.85■□□□□ 0.93
CHFR-209ENST00000535181 DRD3P35462 400 aa20.85■□□□□ 0.93
CHFR-209ENST00000535181 DYNLT1P63172 113 aa20.85■□□□□ 0.93
CHFR-209ENST00000535181 RAD51Q06609 339 aa20.85■□□□□ 0.93
CHFR-209ENST00000535181 ADCY2Q08462 1091 aa20.85■□□□□ 0.93
CHFR-209ENST00000535181 GRM3Q14832 879 aa20.85■□□□□ 0.93
CHFR-209ENST00000535181 PLK5Q496M5 336 aa20.85■□□□□ 0.93
CHFR-209ENST00000535181 PMS2CLQ68D20 193 aa20.85■□□□□ 0.93
CHFR-209ENST00000535181 AADATQ8N5Z0 425 aa20.85■□□□□ 0.93
CHFR-209ENST00000535181 SUMF1Q8NBK3 374 aa20.85■□□□□ 0.93
CHFR-209ENST00000535181 TSEN2Q8NCE0 465 aaKnown RBP20.85■□□□□ 0.93
CHFR-209ENST00000535181 PPP1R16AQ96I34 528 aa20.85■□□□□ 0.93
CHFR-209ENST00000535181 CPEB1Q9BZB8 566 aaKnown RBP20.85■□□□□ 0.93
CHFR-209ENST00000535181 PCED1AQ9H1Q7 454 aa20.85■□□□□ 0.93
CHFR-209ENST00000535181 DUSP15Q9H1R2 295 aaPredicted RBP20.85■□□□□ 0.93
CHFR-209ENST00000535181 SGK2Q9HBY8 427 aa20.85■□□□□ 0.93
CHFR-209ENST00000535181 FBXL12Q9NXK8 326 aa20.85■□□□□ 0.93
CHFR-209ENST00000535181 APOC4-APOC2K7ER74 178 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms