RNA–Protein interactions for RNA: ENST00000534375.1

PICALM-222, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 2

Gene PICALM, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-222	ENST00000534375	SF3B3	Q15393	1217 aa	Known RBP	4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	RPE65	Q16518	533 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	GPR162	Q16538	588 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	ZNF674	Q2M3X9	581 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	COL28A1	Q2UY09	1125 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	ARL13A	Q5H913	290 aa	Predicted RBP	4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	ZNF618	Q5T7W0	954 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	SERTAD4-AS1	Q5TG53	156 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	LRCH2	Q5VUJ6	765 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	SLFN13	Q68D06	897 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	CFAP77	Q6ZQR2	320 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375		Q6ZSN1	163 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375		Q6ZWC4	215 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	GSPT2	Q8IYD1	628 aa	Known RBP	4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	C11orf65	Q8NCR3	313 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	GDAP1	Q8TB36	358 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	NEK9	Q8TD19	979 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	PIGO	Q8TEQ8	1089 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	RFK	Q969G6	155 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	ZNF653	Q96CK0	615 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	TMCO6	Q96DC7	493 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	NAP1L5	Q96NT1	182 aa	Predicted RBP	4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	SYT17	Q9BSW7	474 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	TUBB6	Q9BUF5	446 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	FRMD8	Q9BZ67	464 aa	Predicted RBP	4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	DEF6	Q9H4E7	631 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375		Q9N2J8	555 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	PARD6A	Q9NPB6	346 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	ARHGEF3	Q9NR81	526 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	SLC6A13	Q9NSD5	602 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	PLK2	Q9NYY3	685 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	COQ3	Q9NZJ6	369 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	PPP4R1L	Q9P1A2	415 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	CNOT8	Q9UFF9	292 aa	Known RBP	4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	SEC63	Q9UGP8	760 aa	Known RBP	4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	ANAPC2	Q9UJX6	822 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	ZFR2	Q9UPR6	939 aa	Known RBP	4.23	□□□□□ -1.73
PICALM-222	ENST00000534375		A0A1W2PR77	199 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	WDR27	A2RRH5	827 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	TARSL2	A2RTX5	802 aa	Known RBP	4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	CBY3	A6NI87	242 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	EIF3CL	B5ME19	914 aa	Known RBP	4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	LAMTOR5	O43504	91 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	CCNT1	O60563	726 aa	Known RBP	4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	LPXN	O60711	386 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	FMO6P	O60774	539 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	TPPP	O94811	219 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	IPO7	O95373	1038 aa	Known RBP	4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	SLU7	O95391	586 aa	Known RBP	4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	BMP7	P18075	431 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	TRIM21	P19474	475 aa	Known RBP	4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	ATP5F1	P24539	256 aa	Predicted RBP	4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	GSTM2	P28161	218 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	HNF4A	P41235	474 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	STAT2	P52630	851 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	POLG	P54098	1239 aa	Predicted RBP	4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	ADPRH	P54922	357 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	TPTE	P56180	551 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	WDR5	P61964	334 aa	Known RBP	4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	TAP1	Q03518	808 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	ITIH3	Q06033	890 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	DMWD	Q09019	674 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	AP1B1	Q10567	949 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	SNTB1	Q13884	538 aa	Known RBP	4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	BAAT	Q14032	418 aa	Predicted RBP	4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	NFE2L1	Q14494	772 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	IL11RA	Q14626	422 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	SLMAP	Q14BN4	828 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	BEAN1	Q3B7T3	259 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	RNASE12	Q5GAN4	147 aa	Known RBP	4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	MPP7	Q5T2T1	576 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	ATG9B	Q674R7	924 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	KIRREL2	Q6UWL6	708 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	ZNF804A	Q7Z570	1209 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	TICAM1	Q8IUC6	712 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	LGI4	Q8N135	537 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	GHDC	Q8N2G8	530 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	SIRT6	Q8N6T7	355 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	LINC01465	Q8N7H1	131 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	SRFBP1	Q8NEF9	429 aa	Known RBP	4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	OR8H1	Q8NGG4	311 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	PTP4A1	Q93096	173 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	FUBP1	Q96AE4	644 aa	Known RBP	4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	SIPA1	Q96FS4	1042 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	HS6ST2	Q96MM7	605 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	AGAP2	Q99490	1192 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	SEZ6L	Q9BYH1	1024 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	KRTAP9-3	Q9BYQ3	159 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	PDZD7	Q9H5P4	517 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	ZCCHC4	Q9H5U6	513 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	CXorf56	Q9H5V9	222 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	SFXN1	Q9H9B4	322 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	AKIP1	Q9NQ31	210 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	CHCHD3	Q9NX63	227 aa	Known RBP	4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	ARL15	Q9NXU5	204 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	OGFR	Q9NZT2	677 aa		4.22	□□□□□ -1.73
PICALM-222	ENST00000534375	SEMA5B	Q9P283	1151 aa		4.22	□□□□□ -1.73

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