RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 RHOQP17081 205 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 VASPP50552 380 aaPredicted RBP9.82□□□□□ -0.84
SSBP3-215ENST00000533946 CCNHP51946 323 aaPredicted RBP9.82□□□□□ -0.84
SSBP3-215ENST00000533946 SHC2P98077 582 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 NRG1Q02297 640 aaPredicted RBP9.82□□□□□ -0.84
SSBP3-215ENST00000533946 SULT2A1Q06520 285 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 DNAJC3Q13217 504 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 CYTH1Q15438 398 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 ZNF423Q2M1K9 1284 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 ZNF284Q2VY69 593 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 CCDC157Q569K6 752 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 SFMBT2Q5VUG0 894 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 KANSL1Q7Z3B3 1105 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 TMC6Q7Z403 805 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 SLFN11Q7Z7L1 901 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 ZSWIM9Q86XI8 627 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 ANKRD20A12PQ8NF67 263 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 GATA6Q92908 595 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 SNRNP25Q9BV90 132 aaKnown RBP9.82□□□□□ -0.84
SSBP3-215ENST00000533946 ZDHHC6Q9H6R6 413 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 FBRSQ9HAH7 460 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 AASDHPPTQ9NRN7 309 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 UCKL1Q9NWZ5 548 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 PPARGC1AQ9UBK2 798 aaKnown RBP9.82□□□□□ -0.84
SSBP3-215ENST00000533946 ANGPTL2Q9UKU9 493 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 FZD4Q9ULV1 537 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 ANKRD36A6QL64 1941 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 A0A087X0T9 212 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 A0A1W2PQC6 194 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 POM121BA6NF01 834 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 SMTNL1A8MU46 457 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 UPK3BL1B0FP48 263 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 RASA4BC9J798 803 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 UPK3BL2E5RIL1 263 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 MUSKO15146 869 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 RASA4O43374 803 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 BUB1BO60566 1050 aaPredicted RBP9.81□□□□□ -0.84
SSBP3-215ENST00000533946 SERPINC1P01008 464 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 GYPCP04921 128 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 FAM228BP0C875 321 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 EPHB2P29323 1055 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 MIPP30301 263 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 PRKCIP41743 596 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 GRIA4P48058 902 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 CCR5P51681 352 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 KRT83P78385 493 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 SCAPQ12770 1279 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 SMTNL2Q2TAL5 461 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 ATP13A4Q4VNC1 1196 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 CARD16Q5EG05 197 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 C6orf118Q5T5N4 469 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 KCTD16Q68DU8 428 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 SMYD5Q6GMV2 418 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 RAB44Q7Z6P3 723 aaPredicted RBP9.81□□□□□ -0.84
SSBP3-215ENST00000533946 ARHGAP12Q8IWW6 846 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 SLC22A18ASQ8N1D0 253 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 RTL3Q8N8U3 475 aaKnown RBP9.81□□□□□ -0.84
SSBP3-215ENST00000533946 ZNF557Q8N988 423 aaPredicted RBP9.81□□□□□ -0.84
SSBP3-215ENST00000533946 MSANTD4Q8NCY6 345 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 RHBDD1Q8TEB9 315 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 NTAN1Q96AB6 310 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 TBC1D31Q96DN5 1066 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 BMFQ96LC9 184 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 SMIM14Q96QK8 99 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 CNPY3Q9BT09 278 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 C2orf49Q9BVC5 232 aaPredicted RBP9.81□□□□□ -0.84
SSBP3-215ENST00000533946 PACSIN1Q9BY11 444 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 XPO4Q9C0E2 1151 aaKnown RBP9.81□□□□□ -0.84
SSBP3-215ENST00000533946 SLC39A8Q9C0K1 460 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 HECAQ9UBI9 543 aaPredicted RBP9.81□□□□□ -0.84
SSBP3-215ENST00000533946 LHX3Q9UBR4 397 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 CNOT8Q9UFF9 292 aaKnown RBP9.81□□□□□ -0.84
SSBP3-215ENST00000533946 SUSD2Q9UGT4 822 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 IL36AQ9UHA7 158 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 KLF15Q9UIH9 416 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 NENFQ9UMX5 172 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 SHROOM3Q8TF72 1996 aa9.81□□□□□ -0.84
SSBP3-215ENST00000533946 MYLKQ15746 1914 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 A0A0U1RQS6 177 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 A0A1B0GTQ1 180 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 LRRC72A6NJI9 287 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 TLR4O00206 839 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 KRIT1O00522 736 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 VILLO15195 856 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 KDELR3O43731 214 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 LRCH4O75427 683 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 TMCC1O94876 653 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 PIGNO95427 931 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 PAK4O96013 591 aaPredicted RBP9.8□□□□□ -0.84
SSBP3-215ENST00000533946 CAPNS1P04632 268 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 UGT2B4P06133 528 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 CD48P09326 243 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 PSMA2P25787 234 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 CD38P28907 300 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 L1CAMP32004 1257 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 NNMTP40261 264 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 UBASH3AP57075 661 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 NXPH1P58417 271 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 RACK1P63244 317 aaKnown RBP9.8□□□□□ -0.84
SSBP3-215ENST00000533946 KLHL30Q0D2K2 578 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms