RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 CCNCP24863 283 aa12.94□□□□□ -0.34
RPUSD4-208ENST00000533628 PPIDQ08752 370 aaKnown RBP12.94□□□□□ -0.34
RPUSD4-208ENST00000533628 DMWDQ09019 674 aa12.94□□□□□ -0.34
RPUSD4-208ENST00000533628 TSSK4Q6SA08 328 aa12.94□□□□□ -0.34
RPUSD4-208ENST00000533628 Q6ZVU0 165 aa12.94□□□□□ -0.34
RPUSD4-208ENST00000533628 ATPAF2Q8N5M1 289 aa12.94□□□□□ -0.34
RPUSD4-208ENST00000533628 TEX26Q8N6G2 289 aa12.94□□□□□ -0.34
RPUSD4-208ENST00000533628 PCDH20Q8N6Y1 951 aaKnown RBP12.94□□□□□ -0.34
RPUSD4-208ENST00000533628 OR2A12Q8NGT7 310 aa12.94□□□□□ -0.34
RPUSD4-208ENST00000533628 OR2T3Q8NH03 318 aa12.94□□□□□ -0.34
RPUSD4-208ENST00000533628 ERLEC1Q96DZ1 483 aa12.94□□□□□ -0.34
RPUSD4-208ENST00000533628 WDR24Q96S15 920 aa12.94□□□□□ -0.34
RPUSD4-208ENST00000533628 MKRN2Q9H000 416 aaKnown RBP12.94□□□□□ -0.34
RPUSD4-208ENST00000533628 SP110Q9HB58 689 aa12.94□□□□□ -0.34
RPUSD4-208ENST00000533628 MED4Q9NPJ6 270 aa12.94□□□□□ -0.34
RPUSD4-208ENST00000533628 FBXO4Q9UKT5 387 aa12.94□□□□□ -0.34
RPUSD4-208ENST00000533628 TCRBV21S2A2A0A5A6 115 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 APOC4-APOC2K7ER74 178 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 KCNK3O14649 394 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 APOC2P02655 101 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 CETN2P41208 172 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 ZNF33AQ06730 810 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 SLC10A7Q0GE19 358 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 RFTN1Q14699 578 aaPredicted RBP12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 ERCC6LQ2NKX8 1250 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 ACCSLQ4AC99 568 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 METTL3Q86U44 580 aaKnown RBP12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 STK40Q8N2I9 435 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 TSTD1Q8NFU3 115 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 MRGPRX1Q96LB2 322 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 LGMNQ99538 433 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 SLC6A17Q9H1V8 727 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 RSPH9Q9H1X1 276 aaPredicted RBP12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 TNKS2Q9H2K2 1166 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 CXorf56Q9H5V9 222 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 POLMQ9NP87 494 aaPredicted RBP12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 EBF1Q9UH73 591 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 RNF103O00237 685 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 MUSKO15146 869 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 MATN3O15232 486 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 POLR3GO15318 223 aaPredicted RBP12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 SYNCRIPO60506 623 aaKnown RBP12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 TJP3O95049 919 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 APBB3O95704 486 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 NDUFV2P19404 249 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 GNG11P61952 73 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 LBRQ14739 615 aaKnown RBP12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 STARD3Q14849 445 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 PDK1Q15118 436 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 PRKD1Q15139 912 aaPredicted RBP12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 NOMO1Q15155 1222 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 ANGPT1Q15389 498 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 CARD16Q5EG05 197 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 TMCO4Q5TGY1 634 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 SLC13A5Q86YT5 568 aaPredicted RBP12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 EGFL6Q8IUX8 553 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 PGBD5Q8N414 524 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 GPATCH11Q8N954 259 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 CHST14Q8NCH0 376 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 MDGA1Q8NFP4 955 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 P3H4Q92791 437 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 HAUS1Q96CS2 278 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 FBRSQ9HAH7 460 aa12.93□□□□□ -0.34
RPUSD4-208ENST00000533628 MCF2LO15068 1137 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 GSRP00390 522 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 RGRP47804 291 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 RPS14P62263 151 aaKnown RBP12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 CSTF1Q05048 431 aaKnown RBP12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 SIX1Q15475 284 aaPredicted RBP12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 ZNF528Q3MIS6 628 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 DPY19L3Q6ZPD9 716 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 B4GALNT4Q76KP1 1039 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 CCDC13Q8IYE1 715 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 ACTL9Q8TC94 416 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 PSKH2Q96QS6 385 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 BRD8Q9H0E9 1235 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 PPM1HQ9ULR3 514 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 R3HDM2Q9Y2K5 976 aaKnown RBP12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 CCDC163A0A0D9SF12 145 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 ALOX15BO15296 676 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 CPP00450 1065 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 CTSLP07711 333 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 SP9P0CG40 484 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 OAS2P29728 719 aaKnown RBP12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 CXCR5P32302 372 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 ACTN2P35609 894 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 PXNP49023 591 aaPredicted RBP12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 OTUD4Q01804 1114 aaKnown RBP12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 XRCC4Q13426 336 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 HNRNPDQ14103 355 aaKnown RBP12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 ELAVL3Q14576 367 aaKnown RBP12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 SEL1L2Q5TEA6 688 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 ANO7Q6IWH7 933 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 TIGD7Q6NT04 549 aaPredicted RBP12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 BZW1Q7L1Q6 419 aaKnown RBP12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 TMPRSS6Q8IU80 811 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 RASGEF1CQ8N431 466 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 TSEN2Q8NCE0 465 aaKnown RBP12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 PRSS33Q8NF86 280 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 OR2AP1Q8NGE2 309 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms