RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 NLRP14Q86W24 1093 aa11.55□□□□□ -0.56
CLCF1-202ENST00000533438 CHST14Q8NCH0 376 aa11.55□□□□□ -0.56
CLCF1-202ENST00000533438 TTYH3Q9C0H2 523 aa11.55□□□□□ -0.56
CLCF1-202ENST00000533438 OSBPL2Q9H1P3 480 aa11.55□□□□□ -0.56
CLCF1-202ENST00000533438 RETREG1Q9H6L5 497 aa11.55□□□□□ -0.56
CLCF1-202ENST00000533438 ATP13A1Q9HD20 1204 aa11.55□□□□□ -0.56
CLCF1-202ENST00000533438 SCUBE2Q9NQ36 999 aa11.55□□□□□ -0.56
CLCF1-202ENST00000533438 NDFIP2Q9NV92 336 aa11.55□□□□□ -0.56
CLCF1-202ENST00000533438 IMPACTQ9P2X3 320 aa11.55□□□□□ -0.56
CLCF1-202ENST00000533438 OR12D3Q9UGF7 316 aa11.55□□□□□ -0.56
CLCF1-202ENST00000533438 IL36AQ9UHA7 158 aa11.55□□□□□ -0.56
CLCF1-202ENST00000533438 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.55□□□□□ -0.56
CLCF1-202ENST00000533438 CELSR3Q9NYQ7 3312 aa11.55□□□□□ -0.56
CLCF1-202ENST00000533438 ARID1BQ8NFD5 2236 aaPredicted RBP11.55□□□□□ -0.56
CLCF1-202ENST00000533438 TRPM6Q9BX84 2022 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 A0A1W2PQJ5 194 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 TCRBV5S1A1TA0A578 114 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 GOLGA8CPA6NN73 597 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 FAM72CH0Y354 149 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 PRAMEF26H0Y7S4 382 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 CBX4O00257 560 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 KPNA3O00505 521 aaPredicted RBP11.54□□□□□ -0.56
CLCF1-202ENST00000533438 MAGEC1O60732 1142 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 RNGTTO60942 597 aaKnown RBP11.54□□□□□ -0.56
CLCF1-202ENST00000533438 GJB6O95452 261 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 ARRB1P49407 418 aaPredicted RBP11.54□□□□□ -0.56
CLCF1-202ENST00000533438 HDAC4P56524 1084 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 SLC20A2Q08357 652 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 CCDC173Q0VFZ6 552 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 BNIP3Q12983 259 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 CLEC16AQ2KHT3 1053 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 ARL13BQ3SXY8 428 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 SETMARQ53H47 684 aaPredicted RBP11.54□□□□□ -0.56
CLCF1-202ENST00000533438 FAM72AQ5TYM5 149 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 SFMBT2Q5VUG0 894 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 FAM72DQ6L9T8 149 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 KANSL1Q7Z3B3 1105 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 TMC6Q7Z403 805 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 PHLDB2Q86SQ0 1253 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 FAM72BQ86X60 149 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 PHF13Q86YI8 300 aaPredicted RBP11.54□□□□□ -0.56
CLCF1-202ENST00000533438 GALNT15Q8N3T1 639 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 OXR1Q8N573 874 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 PCDH20Q8N6Y1 951 aaKnown RBP11.54□□□□□ -0.56
CLCF1-202ENST00000533438 TMEM145Q8NBT3 493 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 NEK11Q8NG66 645 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 HDAC8Q9BY41 377 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 MAGEB5Q9BZ81 275 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 EDEM3Q9BZQ6 932 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 CEP44Q9C0F1 390 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 TNKS2Q9H2K2 1166 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 TMEM248Q9NWD8 314 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 FTSJ1Q9UET6 329 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 ZFR2Q9UPR6 939 aaKnown RBP11.54□□□□□ -0.56
CLCF1-202ENST00000533438 WASF2Q9Y6W5 498 aa11.54□□□□□ -0.56
CLCF1-202ENST00000533438 ASH1LQ9NR48 2969 aaKnown RBP11.53□□□□□ -0.56
CLCF1-202ENST00000533438 LEFTY1O75610 366 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 GYPCP04921 128 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 ITGAVP06756 1048 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 KRT3P12035 628 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 RHOQP17081 205 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 RFC1P35251 1148 aaPredicted RBP11.53□□□□□ -0.56
CLCF1-202ENST00000533438 ACVRL1P37023 503 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 NSFP46459 744 aaKnown RBP11.53□□□□□ -0.56
CLCF1-202ENST00000533438 MAPKAPK2P49137 400 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 CCDC15Q0P6D6 951 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 STAT4Q14765 748 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 SMAD1Q15797 465 aaKnown RBP11.53□□□□□ -0.56
CLCF1-202ENST00000533438 CARD16Q5EG05 197 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 ARSIQ5FYB1 569 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 RETSATQ6NUM9 610 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 ERN2Q76MJ5 926 aaKnown RBP11.53□□□□□ -0.56
CLCF1-202ENST00000533438 MON1BQ7L1V2 547 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 PDZD3Q86UT5 571 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 DRC7Q8IY82 874 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 CCDC185Q8N715 623 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 C3orf20Q8ND61 904 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 GRIN3AQ8TCU5 1115 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 FAM172AQ8WUF8 416 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 NTAN1Q96AB6 310 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 PPP1R16AQ96I34 528 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 PCMTD1Q96MG8 357 aaPredicted RBP11.53□□□□□ -0.56
CLCF1-202ENST00000533438 SPON2Q9BUD6 331 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 DYRK4Q9NR20 520 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 ADAM22Q9P0K1 906 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 CA5BQ9Y2D0 317 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 ACTL7AQ9Y615 435 aa11.53□□□□□ -0.56
CLCF1-202ENST00000533438 MYLKQ15746 1914 aa11.52□□□□□ -0.56
CLCF1-202ENST00000533438 TDRD6O60522 2096 aaKnown RBP11.52□□□□□ -0.57
CLCF1-202ENST00000533438 A0A1W2PQU0 124 aa11.52□□□□□ -0.57
CLCF1-202ENST00000533438 SIGLEC16A6NMB1 481 aa11.52□□□□□ -0.57
CLCF1-202ENST00000533438 ENC1O14682 589 aa11.52□□□□□ -0.57
CLCF1-202ENST00000533438 LRIG2O94898 1065 aa11.52□□□□□ -0.57
CLCF1-202ENST00000533438 LDOC1O95751 146 aaPredicted RBP11.52□□□□□ -0.57
CLCF1-202ENST00000533438 CALB1P05937 261 aa11.52□□□□□ -0.57
CLCF1-202ENST00000533438 GPD1P21695 349 aa11.52□□□□□ -0.57
CLCF1-202ENST00000533438 HNRNPA2B1P22626 353 aaKnown RBP11.52□□□□□ -0.57
CLCF1-202ENST00000533438 ITGB7P26010 798 aa11.52□□□□□ -0.57
CLCF1-202ENST00000533438 ETFBP38117 255 aa11.52□□□□□ -0.57
CLCF1-202ENST00000533438 RECQLP46063 649 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms