RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 C1orf216Q8TAB5 229 aa20.81■□□□□ 0.92
CCS-208ENST00000533244 CEP76Q8TAP6 659 aa20.81■□□□□ 0.92
CCS-208ENST00000533244 TM6SF2Q9BZW4 377 aa20.81■□□□□ 0.92
CCS-208ENST00000533244 RXFP3Q9NSD7 469 aa20.81■□□□□ 0.92
CCS-208ENST00000533244 MFHAS1Q9Y4C4 1052 aa20.81■□□□□ 0.92
CCS-208ENST00000533244 PCDHA13Q9Y5I0 950 aa20.81■□□□□ 0.92
CCS-208ENST00000533244 EPN1Q9Y6I3 576 aaPredicted RBP20.81■□□□□ 0.92
CCS-208ENST00000533244 LNP1A1A4G5 178 aa20.8■□□□□ 0.92
CCS-208ENST00000533244 J3KR12 359 aa20.8■□□□□ 0.92
CCS-208ENST00000533244 NDUFA10O95299 355 aa20.8■□□□□ 0.92
CCS-208ENST00000533244 IGHV4-34P06331 123 aa20.8■□□□□ 0.92
CCS-208ENST00000533244 KRT7P08729 469 aa20.8■□□□□ 0.92
CCS-208ENST00000533244 CNTN1Q12860 1018 aa20.8■□□□□ 0.92
CCS-208ENST00000533244 DPYSL3Q14195 570 aa20.8■□□□□ 0.92
CCS-208ENST00000533244 DUOXA1Q1HG43 343 aa20.8■□□□□ 0.92
CCS-208ENST00000533244 TRIM61Q5EBN2 209 aa20.8■□□□□ 0.92
CCS-208ENST00000533244 NCEH1Q6PIU2 408 aa20.8■□□□□ 0.92
CCS-208ENST00000533244 ARRDC3Q96B67 414 aa20.8■□□□□ 0.92
CCS-208ENST00000533244 BIRC7Q96CA5 298 aa20.8■□□□□ 0.92
CCS-208ENST00000533244 HEPHQ9BQS7 1158 aa20.8■□□□□ 0.92
CCS-208ENST00000533244 ORAI3Q9BRQ5 295 aa20.8■□□□□ 0.92
CCS-208ENST00000533244 CAPN10Q9HC96 672 aa20.8■□□□□ 0.92
CCS-208ENST00000533244 PCDH15Q96QU1 1955 aa20.8■□□□□ 0.92
CCS-208ENST00000533244 CACNA1EQ15878 2313 aa20.8■□□□□ 0.92
CCS-208ENST00000533244 LRRC72A6NJI9 287 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 TMEM110-MUSTN1A8MSY1 372 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 PLK4O00444 970 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 PLRG1O43660 514 aaKnown RBP20.79■□□□□ 0.92
CCS-208ENST00000533244 GDF9O60383 454 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 LEFTY1O75610 366 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 MAOBP27338 520 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 LIMK1P53667 647 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 SNRPD1P62314 119 aaKnown RBP20.79■□□□□ 0.92
CCS-208ENST00000533244 IRX4P78413 519 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 KRT81Q14533 505 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 PDK2Q15119 407 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 SPA17Q15506 151 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 AASDHQ4L235 1098 aaPredicted RBP20.79■□□□□ 0.92
CCS-208ENST00000533244 ARSIQ5FYB1 569 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 KIAA0895LQ68EN5 471 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 TMCO3Q6UWJ1 677 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 RAD9BQ6WBX8 426 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.79■□□□□ 0.92
CCS-208ENST00000533244 TP53INP2Q8IXH6 220 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 RGL4Q8IZJ4 473 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 GRIN3AQ8TCU5 1115 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 FAF2Q96CS3 445 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 ZNF670Q9BS34 389 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 KDM4CQ9H3R0 1056 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 LHX3Q9UBR4 397 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 UBA2Q9UBT2 640 aaPredicted RBP20.79■□□□□ 0.92
CCS-208ENST00000533244 SUSD2Q9UGT4 822 aa20.79■□□□□ 0.92
CCS-208ENST00000533244 A0A0A6YYK5 440 aaPredicted RBP20.78■□□□□ 0.92
CCS-208ENST00000533244 KPNA3O00505 521 aaPredicted RBP20.78■□□□□ 0.92
CCS-208ENST00000533244 SERPINF2P08697 491 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 GJC1P36383 396 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 DNA2P51530 1060 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 MMRN1Q13201 1228 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 CYTH1Q15438 398 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 POM121L1PQ3SYA9 428 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 PIP5KL1Q5T9C9 394 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 ARHGAP36Q6ZRI8 547 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 NETO2Q8NC67 525 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 OR14C36Q8NHC7 312 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 NETO1Q8TDF5 533 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 LRIG1Q96JA1 1093 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 HDAC8Q9BY41 377 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 LUC7LQ9NQ29 371 aaKnown RBP20.78■□□□□ 0.92
CCS-208ENST00000533244 DLL3Q9NYJ7 618 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 EIF2B4Q9UI10 523 aaKnown RBP20.78■□□□□ 0.92
CCS-208ENST00000533244 SLC6A14Q9UN76 642 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 REXO2Q9Y3B8 237 aaKnown RBP20.78■□□□□ 0.92
CCS-208ENST00000533244 DCHS1Q96JQ0 3298 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 SERPINB6P35237 376 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 SLC1A1P43005 524 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 CCR5P51681 352 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 TAS2R38P59533 333 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 IL10RBQ08334 325 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 MYLK3Q32MK0 819 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 LRRC38Q5VT99 294 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 PCDH19Q8TAB3 1148 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 RMDN1Q96DB5 314 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 GDAP1L1Q96MZ0 367 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 BAG1Q99933 345 aaPredicted RBP20.78■□□□□ 0.92
CCS-208ENST00000533244 NUSAP1Q9BXS6 441 aaKnown RBP20.78■□□□□ 0.92
CCS-208ENST00000533244 IPO11Q9UI26 975 aaKnown RBP20.78■□□□□ 0.92
CCS-208ENST00000533244 TPX2Q9ULW0 747 aaKnown RBP20.78■□□□□ 0.92
CCS-208ENST00000533244 TFR2Q9UP52 801 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 SLCO1B1Q9Y6L6 691 aa20.78■□□□□ 0.92
CCS-208ENST00000533244 A0A1B0GTW7 788 aa20.77■□□□□ 0.91
CCS-208ENST00000533244 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.77■□□□□ 0.91
CCS-208ENST00000533244 DFFAO00273 331 aa20.77■□□□□ 0.91
CCS-208ENST00000533244 FSBPO95073 299 aa20.77■□□□□ 0.91
CCS-208ENST00000533244 POP4O95707 220 aaKnown RBP20.77■□□□□ 0.91
CCS-208ENST00000533244 GNSP15586 552 aa20.77■□□□□ 0.91
CCS-208ENST00000533244 ITGB7P26010 798 aa20.77■□□□□ 0.91
CCS-208ENST00000533244 CD27P26842 260 aa20.77■□□□□ 0.91
CCS-208ENST00000533244 RHOAP61586 193 aa20.77■□□□□ 0.91
CCS-208ENST00000533244 RSPO4Q2I0M5 234 aaPredicted RBP20.77■□□□□ 0.91
CCS-208ENST00000533244 ATXN7L2Q5T6C5 722 aaPredicted RBP20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms