RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 ARHGEF26Q96DR7 871 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 C16orf45Q96MC5 204 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 THAP2Q9H0W7 228 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 USP29Q9HBJ7 922 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 ABCB8Q9NUT2 735 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 ADAM22Q9P0K1 906 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 SERGEFQ9UGK8 458 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 GGA2Q9UJY4 613 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 STRIP2Q9ULQ0 834 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 CEP83Q9Y592 693 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 UBR5O95071 2799 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 USP9XQ93008 2570 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 A0A1B0GVM2 712 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 MACROD2A1Z1Q3 448 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 CDRT15L2A8MXV6 281 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 HHLA1C9JL84 531 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 M0QYV0 167 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 MID1O15344 667 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 LATO43561 262 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 KIF5CO60282 957 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 MOCS3O95396 460 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 GJB6O95452 261 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 CYP1A2P05177 515 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 ALPPL2P10696 532 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 PABPC1P11940 636 aaKnown RBP11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 GOT1P17174 413 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 MMP8P22894 467 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 ADORA2BP29275 332 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 GPD2P43304 727 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 NOP2P46087 812 aaKnown RBP11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 HARS2P49590 506 aaKnown RBP11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 ETF1P62495 437 aaKnown RBP11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 TLE1Q04724 770 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 PTP4A2Q12974 167 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 STAT4Q14765 748 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 CLEC20AQ6ZU45 233 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 SCD5Q86SK9 330 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 PHLDB2Q86SQ0 1253 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 PRPF39Q86UA1 669 aaKnown RBP11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 RNF10Q8N5U6 811 aaKnown RBP11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 OR14C36Q8NHC7 312 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 SLC35G2Q8TBE7 412 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 PLD4Q96BZ4 506 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 OSBPL2Q9H1P3 480 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 MARCH2Q9P0N8 246 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 MYO1AQ9UBC5 1043 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 HESX1Q9UBX0 185 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 TSPAN16Q9UKR8 245 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 ATXN7L1Q9ULK2 861 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 ARID1BQ8NFD5 2236 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 AHCTF1Q8WYP5 2266 aa11.61□□□□□ -0.55
TRAPPC4-213ENST00000533149 TBC1D3DA0A087WVF3 549 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 TBC1D3IA0A087WXS9 549 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 TBC1D3EA0A087X179 549 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 TBC1D3KA0A087X1G2 549 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 A0A0A6YYK5 440 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 TBC1D3FA6NER0 549 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 TBC1D3LB9A6J9 549 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 KIF2AO00139 706 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 BUB1O43683 1085 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 SIN3BO75182 1162 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 TUBB4AP04350 444 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 TBC1D3HP0C7X1 549 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 MYBL1P10243 752 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 DGKAP23743 735 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 SLC8A1P32418 973 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 ADPRHP54922 357 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 HNRNPA1L2Q32P51 320 aaKnown RBP11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 C2CD6Q53TS8 623 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 TBC1D3GQ6DHY5 549 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 TBC1D3CQ6IPX1 549 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 SYT10Q6XYQ8 523 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 MMS22LQ6ZRQ5 1243 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 MON1BQ7L1V2 547 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 RSRC2Q7L4I2 434 aaKnown RBP11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 CLEC14AQ86T13 490 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 MMAAQ8IVH4 418 aaKnown RBP11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 TBC1D3Q8IZP1 549 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 ARHGAP18Q8N392 663 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 ZNF557Q8N988 423 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 ANKRD52Q8NB46 1076 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 MAPK15Q8TD08 544 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 ZNF653Q96CK0 615 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 SGF29Q96ES7 293 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 TMA16Q96EY4 203 aaKnown RBP11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 TRIM11Q96F44 468 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 NOX5Q96PH1 765 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 C11orf70Q9BRQ4 267 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 CTTNBP2NLQ9P2B4 639 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 CNOT8Q9UFF9 292 aaKnown RBP11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 CYTH4Q9UIA0 394 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 DMTF1Q9Y222 760 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 SLC12A8A0AV02 714 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 NEMP2A6NFY4 417 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 FFAR2O15552 330 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 ATMINO43313 823 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 PPFIA2O75334 1257 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 CALB1P05937 261 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 SETSIPP0DME0 302 aa11.6□□□□□ -0.55
TRAPPC4-213ENST00000533149 C5AR1P21730 350 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms