RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 OTUD4Q01804 1114 aaKnown RBP11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 RAD51Q06609 339 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 SFSWAPQ12872 951 aaKnown RBP11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 KLF1Q13351 362 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 ZNF235Q14590 738 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 NOMO1Q15155 1222 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 ANGPT1Q15389 498 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 LONRF2Q1L5Z9 754 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 MYLK3Q32MK0 819 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 DPY19L3Q6ZPD9 716 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 MMAAQ8IVH4 418 aaKnown RBP11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 MAML2Q8IZL2 1156 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 TEX26Q8N6G2 289 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 OR2AP1Q8NGE2 309 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 ACTL9Q8TC94 416 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 LRRN4Q8WUT4 740 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 HMGB4Q8WW32 186 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 MAIP1Q8WWC4 291 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 MAML1Q92585 1016 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 SIPA1Q96FS4 1042 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 MRGPRX1Q96LB2 322 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 GDAP1L1Q96MZ0 367 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 PSKH2Q96QS6 385 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 FAM129BQ96TA1 746 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 NAPGQ99747 312 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 HEPHQ9BQS7 1158 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 HERPUD2Q9BSE4 406 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 FAM126AQ9BYI3 521 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 TM6SF2Q9BZW4 377 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 MKRN2Q9H000 416 aaKnown RBP11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 RSPH9Q9H1X1 276 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 CD248Q9HCU0 757 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 RBM22Q9NW64 420 aaKnown RBP eCLIP11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 SNX12Q9UMY4 172 aa11.42□□□□□ -0.58
TRAPPC4-211ENST00000533012 CCDC163A0A0D9SF12 145 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 KCNK1O00180 336 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 AXIN1O15169 862 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 ALOX15BO15296 676 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 MTSS1O43312 755 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 ZNF189O75820 626 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 IL1BP01584 269 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 JCHAINP01591 159 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 FGGP02679 453 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 DNTTP04053 509 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 PRNPP04156 253 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 SP9P0CG40 484 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 RBP3P10745 1247 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 PRLRP16471 622 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 TCP1P17987 556 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 NDUFV2P19404 249 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 CASQ1P31415 396 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 MMP13P45452 471 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 CSNK1DP48730 415 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 PXNP49023 591 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 CCNHP51946 323 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 EIF3EP60228 445 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 RPS14P62263 151 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 ETF1P62495 437 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 ZBTB16Q05516 673 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 ITKQ08881 620 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 BYSLQ13895 437 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 PRKD1Q15139 912 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 ZNF528Q3MIS6 628 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 USP39Q53GS9 565 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 SLC45A4Q5BKX6 768 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 ARSIQ5FYB1 569 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 FAM46CQ5VWP2 391 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 ZNF776Q68DI1 518 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 HEATR6Q6AI08 1181 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 DARS2Q6PI48 645 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 KIAA1324Q6UXG2 1013 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 B4GALNT4Q76KP1 1039 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 LONP2Q86WA8 852 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 RASSF3Q86WH2 238 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 TSEN2Q8NCE0 465 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 TMIEQ8NEW7 156 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 MDGA1Q8NFP4 955 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 LRIG1Q96JA1 1093 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 WDR24Q96S15 920 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 OSBPL9Q96SU4 736 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 NAP1L3Q99457 506 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 FRMD8P1Q9BZ68 369 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 SEPT10Q9P0V9 454 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 IL36AQ9UHA7 158 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 AMACRQ9UHK6 382 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 PPM1HQ9ULR3 514 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 SCML1Q9UN30 329 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 DOCK4Q8N1I0 1966 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 MIA3Q5JRA6 1907 aa11.41□□□□□ -0.58
TRAPPC4-211ENST00000533012 TCRBV7S2A1N4TA0A589 114 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 C1QTNF3-AMACRE9PGA6 284 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 KRIT1O00522 736 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 CES2O00748 559 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 ZNF217O75362 1048 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 TDGF1P13385 188 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 C5AR1P21730 350 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 CES1P23141 567 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 SLC8A1P32418 973 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 FNTBP49356 437 aa11.4□□□□□ -0.58
TRAPPC4-211ENST00000533012 SCNN1BP51168 640 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms