RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 OLFM3Q96PB7 478 aa22.65■■□□□ 1.22
LRRK1-208ENST00000532029 FAM129BQ96TA1 746 aa22.65■■□□□ 1.22
LRRK1-208ENST00000532029 HERPUD2Q9BSE4 406 aa22.65■■□□□ 1.22
LRRK1-208ENST00000532029 IRF2BPLQ9H1B7 796 aa22.65■■□□□ 1.22
LRRK1-208ENST00000532029 ZNF318Q5VUA4 2279 aa22.65■■□□□ 1.22
LRRK1-208ENST00000532029 H0Y858 1186 aa22.64■■□□□ 1.21
LRRK1-208ENST00000532029 ENC1O14682 589 aa22.64■■□□□ 1.21
LRRK1-208ENST00000532029 MATN3O15232 486 aa22.64■■□□□ 1.21
LRRK1-208ENST00000532029 NEBLO76041 1014 aa22.64■■□□□ 1.21
LRRK1-208ENST00000532029 IL1BP01584 269 aa22.64■■□□□ 1.21
LRRK1-208ENST00000532029 DNTTP04053 509 aa22.64■■□□□ 1.21
LRRK1-208ENST00000532029 CHRNA3P32297 505 aa22.64■■□□□ 1.21
LRRK1-208ENST00000532029 RENBPP51606 427 aa22.64■■□□□ 1.21
LRRK1-208ENST00000532029 CCNHP51946 323 aaPredicted RBP22.64■■□□□ 1.21
LRRK1-208ENST00000532029 GNG11P61952 73 aa22.64■■□□□ 1.21
LRRK1-208ENST00000532029 ZBTB16Q05516 673 aa22.64■■□□□ 1.21
LRRK1-208ENST00000532029 RAD51Q06609 339 aa22.64■■□□□ 1.21
LRRK1-208ENST00000532029 PPIDQ08752 370 aaKnown RBP22.64■■□□□ 1.21
LRRK1-208ENST00000532029 SLC10A7Q0GE19 358 aa22.64■■□□□ 1.21
LRRK1-208ENST00000532029 MARC1Q5VT66 337 aa22.64■■□□□ 1.21
LRRK1-208ENST00000532029 DPY19L3Q6ZPD9 716 aa22.64■■□□□ 1.21
LRRK1-208ENST00000532029 MMAAQ8IVH4 418 aaKnown RBP22.64■■□□□ 1.21
LRRK1-208ENST00000532029 LGMNQ99538 433 aa22.64■■□□□ 1.21
LRRK1-208ENST00000532029 HEPHQ9BQS7 1158 aa22.64■■□□□ 1.21
LRRK1-208ENST00000532029 KCND1Q9NSA2 647 aa22.64■■□□□ 1.21
LRRK1-208ENST00000532029 LHX3Q9UBR4 397 aa22.64■■□□□ 1.21
LRRK1-208ENST00000532029 IL36AQ9UHA7 158 aa22.64■■□□□ 1.21
LRRK1-208ENST00000532029 C1QTNF3-AMACRE9PGA6 284 aa22.63■■□□□ 1.21
LRRK1-208ENST00000532029 PEX11BO96011 259 aa22.63■■□□□ 1.21
LRRK1-208ENST00000532029 ADH1BP00325 375 aa22.63■■□□□ 1.21
LRRK1-208ENST00000532029 PRNPP04156 253 aa22.63■■□□□ 1.21
LRRK1-208ENST00000532029 HSPA9P38646 679 aaKnown RBP22.63■■□□□ 1.21
LRRK1-208ENST00000532029 PSMD8P48556 350 aa22.63■■□□□ 1.21
LRRK1-208ENST00000532029 PTPN5P54829 565 aa22.63■■□□□ 1.21
LRRK1-208ENST00000532029 ZNF33AQ06730 810 aa22.63■■□□□ 1.21
LRRK1-208ENST00000532029 AP1B1Q10567 949 aa22.63■■□□□ 1.21
LRRK1-208ENST00000532029 TCF15Q12870 199 aa22.63■■□□□ 1.21
LRRK1-208ENST00000532029 SFSWAPQ12872 951 aaKnown RBP22.63■■□□□ 1.21
LRRK1-208ENST00000532029 BYSLQ13895 437 aaKnown RBP22.63■■□□□ 1.21
LRRK1-208ENST00000532029 HNRNPDQ14103 355 aaKnown RBP22.63■■□□□ 1.21
LRRK1-208ENST00000532029 CST6Q15828 149 aa22.63■■□□□ 1.21
LRRK1-208ENST00000532029 TTC31Q49AM3 519 aaPredicted RBP22.63■■□□□ 1.21
LRRK1-208ENST00000532029 USP39Q53GS9 565 aaKnown RBP22.63■■□□□ 1.21
LRRK1-208ENST00000532029 HS1BP3Q53T59 392 aa22.63■■□□□ 1.21
LRRK1-208ENST00000532029 ATXN7L2Q5T6C5 722 aaPredicted RBP22.63■■□□□ 1.21
LRRK1-208ENST00000532029 FAM46CQ5VWP2 391 aa22.63■■□□□ 1.21
LRRK1-208ENST00000532029 TTC13Q8NBP0 860 aa22.63■■□□□ 1.21
LRRK1-208ENST00000532029 CHST14Q8NCH0 376 aa22.63■■□□□ 1.21
LRRK1-208ENST00000532029 LRRN4Q8WUT4 740 aa22.63■■□□□ 1.21
LRRK1-208ENST00000532029 NELL1Q92832 810 aa22.63■■□□□ 1.21
LRRK1-208ENST00000532029 FATE1Q969F0 183 aa22.63■■□□□ 1.21
LRRK1-208ENST00000532029 ZDHHC6Q9H6R6 413 aa22.63■■□□□ 1.21
LRRK1-208ENST00000532029 HAUS2Q9NVX0 235 aa22.63■■□□□ 1.21
LRRK1-208ENST00000532029 SCML1Q9UN30 329 aa22.63■■□□□ 1.21
LRRK1-208ENST00000532029 CACNA1IQ9P0X4 2223 aa22.62■■□□□ 1.21
LRRK1-208ENST00000532029 ZNF217O75362 1048 aa22.62■■□□□ 1.21
LRRK1-208ENST00000532029 POP4O95707 220 aaKnown RBP22.62■■□□□ 1.21
LRRK1-208ENST00000532029 SLC8A1P32418 973 aa22.62■■□□□ 1.21
LRRK1-208ENST00000532029 MMP13P45452 471 aa22.62■■□□□ 1.21
LRRK1-208ENST00000532029 MYLK3Q32MK0 819 aa22.62■■□□□ 1.21
LRRK1-208ENST00000532029 ZC3H18Q86VM9 953 aaKnown RBP22.62■■□□□ 1.21
LRRK1-208ENST00000532029 C17orf53Q8N3J3 647 aaPredicted RBP22.62■■□□□ 1.21
LRRK1-208ENST00000532029 TSEN2Q8NCE0 465 aaKnown RBP22.62■■□□□ 1.21
LRRK1-208ENST00000532029 OR6K2Q8NGY2 324 aa22.62■■□□□ 1.21
LRRK1-208ENST00000532029 PIP4K2CQ8TBX8 421 aa22.62■■□□□ 1.21
LRRK1-208ENST00000532029 ACTL9Q8TC94 416 aa22.62■■□□□ 1.21
LRRK1-208ENST00000532029 GRIN3AQ8TCU5 1115 aa22.62■■□□□ 1.21
LRRK1-208ENST00000532029 TFB1MQ8WVM0 346 aaKnown RBP22.62■■□□□ 1.21
LRRK1-208ENST00000532029 MAML1Q92585 1016 aa22.62■■□□□ 1.21
LRRK1-208ENST00000532029 EXOC2Q96KP1 924 aa22.62■■□□□ 1.21
LRRK1-208ENST00000532029 PSKH2Q96QS6 385 aa22.62■■□□□ 1.21
LRRK1-208ENST00000532029 PCDHGA2Q9Y5H1 932 aa22.62■■□□□ 1.21
LRRK1-208ENST00000532029 HACD1B0YJ81 288 aa22.61■■□□□ 1.21
LRRK1-208ENST00000532029 H7C0C1 242 aa22.61■■□□□ 1.21
LRRK1-208ENST00000532029 KRIT1O00522 736 aa22.61■■□□□ 1.21
LRRK1-208ENST00000532029 CCNB1P14635 433 aa22.61■■□□□ 1.21
LRRK1-208ENST00000532029 C5AR1P21730 350 aa22.61■■□□□ 1.21
LRRK1-208ENST00000532029 ATP5OP48047 213 aa22.61■■□□□ 1.21
LRRK1-208ENST00000532029 OTUD4Q01804 1114 aaKnown RBP22.61■■□□□ 1.21
LRRK1-208ENST00000532029 NOMO1Q15155 1222 aa22.61■■□□□ 1.21
LRRK1-208ENST00000532029 ARSIQ5FYB1 569 aa22.61■■□□□ 1.21
LRRK1-208ENST00000532029 ZC3H14Q6PJT7 736 aaKnown RBP22.61■■□□□ 1.21
LRRK1-208ENST00000532029 SLC13A5Q86YT5 568 aaPredicted RBP22.61■■□□□ 1.21
LRRK1-208ENST00000532029 ZBTB44Q8NCP5 570 aa22.61■■□□□ 1.21
LRRK1-208ENST00000532029 TMIEQ8NEW7 156 aa22.61■■□□□ 1.21
LRRK1-208ENST00000532029 GANCQ8TET4 914 aa22.61■■□□□ 1.21
LRRK1-208ENST00000532029 SPACA7Q96KW9 195 aa22.61■■□□□ 1.21
LRRK1-208ENST00000532029 PABPC3Q9H361 631 aaKnown RBP22.61■■□□□ 1.21
LRRK1-208ENST00000532029 RBM22Q9NW64 420 aaKnown RBP eCLIP22.61■■□□□ 1.21
LRRK1-208ENST00000532029 SEPT10Q9P0V9 454 aa22.61■■□□□ 1.21
LRRK1-208ENST00000532029 EVLQ9UI08 416 aaPredicted RBP22.61■■□□□ 1.21
LRRK1-208ENST00000532029 PPM1HQ9ULR3 514 aa22.61■■□□□ 1.21
LRRK1-208ENST00000532029 NCKAP1Q9Y2A7 1128 aa22.61■■□□□ 1.21
LRRK1-208ENST00000532029 MID1O15344 667 aa22.6■■□□□ 1.21
LRRK1-208ENST00000532029 CEP104O60308 925 aa22.6■■□□□ 1.21
LRRK1-208ENST00000532029 ATP1A1P05023 1023 aaKnown RBP22.6■■□□□ 1.21
LRRK1-208ENST00000532029 CTSLP07711 333 aa22.6■■□□□ 1.21
LRRK1-208ENST00000532029 CNR2P34972 360 aa22.6■■□□□ 1.21
LRRK1-208ENST00000532029 NSUN2Q08J23 767 aaKnown RBP eCLIP22.6■■□□□ 1.21
LRRK1-208ENST00000532029 XRCC4Q13426 336 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms