RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 LGMNQ99538 433 aa16.31■□□□□ 0.2
BRK1-201ENST00000530758 FAM126AQ9BYI3 521 aaPredicted RBP16.31■□□□□ 0.2
BRK1-201ENST00000530758 FRMD8P1Q9BZ68 369 aaPredicted RBP16.31■□□□□ 0.2
BRK1-201ENST00000530758 MTG2Q9H4K7 406 aa16.31■□□□□ 0.2
BRK1-201ENST00000530758 LHX3Q9UBR4 397 aa16.31■□□□□ 0.2
BRK1-201ENST00000530758 SNX12Q9UMY4 172 aa16.31■□□□□ 0.2
BRK1-201ENST00000530758 FCF1Q9Y324 198 aaKnown RBP16.31■□□□□ 0.2
BRK1-201ENST00000530758 PLXND1Q9Y4D7 1925 aa16.31■□□□□ 0.2
BRK1-201ENST00000530758 ZFHX2Q9C0A1 2572 aaPredicted RBP16.31■□□□□ 0.2
BRK1-201ENST00000530758 FANCMQ8IYD8 2048 aa16.3■□□□□ 0.2
BRK1-201ENST00000530758 ALDH1A2O94788 518 aa16.3■□□□□ 0.2
BRK1-201ENST00000530758 APBB3O95704 486 aa16.3■□□□□ 0.2
BRK1-201ENST00000530758 VAV1P15498 845 aa16.3■□□□□ 0.2
BRK1-201ENST00000530758 GABRG2P18507 467 aa16.3■□□□□ 0.2
BRK1-201ENST00000530758 SNRPD1P62314 119 aaKnown RBP16.3■□□□□ 0.2
BRK1-201ENST00000530758 IFI35P80217 286 aaPredicted RBP16.3■□□□□ 0.2
BRK1-201ENST00000530758 OTUD4Q01804 1114 aaKnown RBP16.3■□□□□ 0.2
BRK1-201ENST00000530758 ZBTB16Q05516 673 aa16.3■□□□□ 0.2
BRK1-201ENST00000530758 MARC1Q5VT66 337 aa16.3■□□□□ 0.2
BRK1-201ENST00000530758 LEKR1Q6ZMV7 388 aa16.3■□□□□ 0.2
BRK1-201ENST00000530758 Q6ZVU0 165 aa16.3■□□□□ 0.2
BRK1-201ENST00000530758 TMIEQ8NEW7 156 aa16.3■□□□□ 0.2
BRK1-201ENST00000530758 TSTD1Q8NFU3 115 aa16.3■□□□□ 0.2
BRK1-201ENST00000530758 OR2AP1Q8NGE2 309 aa16.3■□□□□ 0.2
BRK1-201ENST00000530758 NSMCE1Q8WV22 266 aa16.3■□□□□ 0.2
BRK1-201ENST00000530758 ATOH1Q92858 354 aaPredicted RBP16.3■□□□□ 0.2
BRK1-201ENST00000530758 LRIG1Q96JA1 1093 aa16.3■□□□□ 0.2
BRK1-201ENST00000530758 MRGPRX1Q96LB2 322 aa16.3■□□□□ 0.2
BRK1-201ENST00000530758 CCDC114Q96M63 670 aa16.3■□□□□ 0.2
BRK1-201ENST00000530758 OSBPL9Q96SU4 736 aa16.3■□□□□ 0.2
BRK1-201ENST00000530758 IL12RB2Q99665 862 aa16.3■□□□□ 0.2
BRK1-201ENST00000530758 MKRN2Q9H000 416 aaKnown RBP16.3■□□□□ 0.2
BRK1-201ENST00000530758 SEPT3Q9UH03 358 aa16.3■□□□□ 0.2
BRK1-201ENST00000530758 PPM1HQ9ULR3 514 aa16.3■□□□□ 0.2
BRK1-201ENST00000530758 SCML1Q9UN30 329 aa16.3■□□□□ 0.2
BRK1-201ENST00000530758 TCRBV7S2A1N4TA0A589 114 aa16.29■□□□□ 0.2
BRK1-201ENST00000530758 FANCGO15287 622 aa16.29■□□□□ 0.2
BRK1-201ENST00000530758 ZNF189O75820 626 aaPredicted RBP16.29■□□□□ 0.2
BRK1-201ENST00000530758 POP4O95707 220 aaKnown RBP16.29■□□□□ 0.2
BRK1-201ENST00000530758 TUBB4AP04350 444 aa16.29■□□□□ 0.2
BRK1-201ENST00000530758 CCNB1P14635 433 aa16.29■□□□□ 0.2
BRK1-201ENST00000530758 TCP1P17987 556 aaKnown RBP16.29■□□□□ 0.2
BRK1-201ENST00000530758 CR2P20023 1033 aa16.29■□□□□ 0.2
BRK1-201ENST00000530758 ANGPT1Q15389 498 aa16.29■□□□□ 0.2
BRK1-201ENST00000530758 SIX1Q15475 284 aaPredicted RBP16.29■□□□□ 0.2
BRK1-201ENST00000530758 MYLK3Q32MK0 819 aa16.29■□□□□ 0.2
BRK1-201ENST00000530758 SLC45A4Q5BKX6 768 aa16.29■□□□□ 0.2
BRK1-201ENST00000530758 RALGPS1Q5JS13 557 aa16.29■□□□□ 0.2
BRK1-201ENST00000530758 ALG1LQ6GMV1 187 aa16.29■□□□□ 0.2
BRK1-201ENST00000530758 DPY19L3Q6ZPD9 716 aa16.29■□□□□ 0.2
BRK1-201ENST00000530758 TMPRSS6Q8IU80 811 aa16.29■□□□□ 0.2
BRK1-201ENST00000530758 STK40Q8N2I9 435 aa16.29■□□□□ 0.2
BRK1-201ENST00000530758 TSEN2Q8NCE0 465 aaKnown RBP16.29■□□□□ 0.2
BRK1-201ENST00000530758 CCNYQ8ND76 341 aa16.29■□□□□ 0.2
BRK1-201ENST00000530758 SLC35B2Q8TB61 432 aa16.29■□□□□ 0.2
BRK1-201ENST00000530758 ACTRT1Q8TDG2 376 aa16.29■□□□□ 0.2
BRK1-201ENST00000530758 TFB1MQ8WVM0 346 aaKnown RBP16.29■□□□□ 0.2
BRK1-201ENST00000530758 MAIP1Q8WWC4 291 aa16.29■□□□□ 0.2
BRK1-201ENST00000530758 NAPGQ99747 312 aaPredicted RBP16.29■□□□□ 0.2
BRK1-201ENST00000530758 MGME1Q9BQP7 344 aa16.29■□□□□ 0.2
BRK1-201ENST00000530758 CPEB1Q9BZB8 566 aaKnown RBP16.29■□□□□ 0.2
BRK1-201ENST00000530758 ATP8A1Q9Y2Q0 1164 aa16.29■□□□□ 0.2
BRK1-201ENST00000530758 FARP1Q9Y4F1 1045 aaPredicted RBP16.29■□□□□ 0.2
BRK1-201ENST00000530758 ANKRD36A6QL64 1941 aa16.29■□□□□ 0.2
BRK1-201ENST00000530758 TCRBV21S2A2A0A5A6 115 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 BCLAF3A2AJT9 711 aaKnown RBP16.28■□□□□ 0.2
BRK1-201ENST00000530758 MUSKO15146 869 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 MTSS1O43312 755 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 CEP104O60308 925 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 NDUFV2P19404 249 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 CES1P23141 567 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 CHRNA3P32297 505 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 CXCR5P32302 372 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 NBL1P41271 181 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 MMP13P45452 471 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 RECQLP46063 649 aaPredicted RBP16.28■□□□□ 0.2
BRK1-201ENST00000530758 NRLP54845 237 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 RHOAP61586 193 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 RPS14P62263 151 aaKnown RBP16.28■□□□□ 0.2
BRK1-201ENST00000530758 AP1B1Q10567 949 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 CCDC181Q5TID7 509 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 DRICH1Q6PGQ1 229 aaPredicted RBP16.28■□□□□ 0.2
BRK1-201ENST00000530758 DSG4Q86SJ6 1040 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 BBS5Q8N3I7 341 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 PGBD5Q8N414 524 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 MDGA1Q8NFP4 955 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 OR8D1Q8WZ84 308 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 FAM131CQ96AQ9 280 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 ZNF419Q96HQ0 510 aaPredicted RBP16.28■□□□□ 0.2
BRK1-201ENST00000530758 GDAP1L1Q96MZ0 367 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 QKIQ96PU8 341 aaKnown RBP eCLIP16.28■□□□□ 0.2
BRK1-201ENST00000530758 HHIPQ96QV1 700 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 HEPHQ9BQS7 1158 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 CINPQ9BW66 212 aaPredicted RBP16.28■□□□□ 0.2
BRK1-201ENST00000530758 TNKS2Q9H2K2 1166 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 ITM2CQ9NQX7 267 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 WASF2Q9Y6W5 498 aa16.28■□□□□ 0.2
BRK1-201ENST00000530758 CTAGE9A4FU28 777 aa16.27■□□□□ 0.2
BRK1-201ENST00000530758 PROB1E7EW31 1015 aa16.27■□□□□ 0.2
BRK1-201ENST00000530758 ZBTB24O43167 697 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms