RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 SPTLC3Q9NUV7 552 aa15.22■□□□□ 0.03
PPFIA1-216ENST00000530746 CWC15Q9P013 229 aaKnown RBP15.22■□□□□ 0.03
PPFIA1-216ENST00000530746 TMEM131Q92545 1883 aa15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 DCDC2BA2VCK2 349 aa15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 C10orf142B7Z368 130 aa15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 KPNA3O00505 521 aaPredicted RBP15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 ARHGAP33O14559 1287 aa15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 PLRG1O43660 514 aaKnown RBP15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 LEFTY1O75610 366 aa15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 SYPP08247 313 aa15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 MAPK8P45983 427 aa15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 CCNHP51946 323 aaPredicted RBP15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 DPYSQ14117 519 aa15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 INO80DQ53TQ3 878 aaPredicted RBP15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 ARSIQ5FYB1 569 aa15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 AGBL4Q5VU57 503 aa15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 TXNRD3NBQ6F5E7 133 aa15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 ERMP1Q7Z2K6 904 aa15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 OR2AP1Q8NGE2 309 aa15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 GRIN3AQ8TCU5 1115 aa15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 CELF6Q96J87 481 aaKnown RBP15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 HEPHQ9BQS7 1158 aa15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 TM6SF2Q9BZW4 377 aa15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 OSGEPQ9NPF4 335 aa15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 HECAQ9UBI9 543 aaPredicted RBP15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 LCMT1Q9UIC8 334 aa15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 TPX2Q9ULW0 747 aaKnown RBP15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 WASF2Q9Y6W5 498 aa15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 CACNA1AO00555 2505 aa15.21■□□□□ 0.03
PPFIA1-216ENST00000530746 KNL1Q8NG31 2342 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 TBC1D3DA0A087WVF3 549 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 TBC1D3IA0A087WXS9 549 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 TBC1D3EA0A087X179 549 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 TBC1D3KA0A087X1G2 549 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 TBC1D3FA6NER0 549 aaPredicted RBP15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 ARHGAP42A6NI28 874 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 TBC1D3LB9A6J9 549 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 H3BRJ5 948 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 RNF103O00237 685 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 TM4SF5O14894 197 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 TMCC1O94876 653 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 PROSCO94903 275 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 GSRP00390 522 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 TBC1D3HP0C7X1 549 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 ARL4AP40617 200 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 CCR5P51681 352 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 ATXN3P54252 364 aaPredicted RBP15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 SNRPD1P62314 119 aaKnown RBP15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 CCDC15Q0P6D6 951 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 HADHQ16836 314 aaKnown RBP15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 PIP5KL1Q5T9C9 394 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 AFMIDQ63HM1 303 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 TBC1D3GQ6DHY5 549 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 TBC1D3CQ6IPX1 549 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 POLNQ7Z5Q5 900 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 TBC1D3Q8IZP1 549 aaPredicted RBP15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 RYBPQ8N488 228 aaPredicted RBP15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 NPWQ8N729 165 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 ARRDC3Q96B67 414 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 PPP1R16AQ96I34 528 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 ORAI3Q9BRQ5 295 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 GTPBP2Q9BX10 602 aaKnown RBP15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 SLC39A8Q9C0K1 460 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 DYRK4Q9NR20 520 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 SLCO1B1Q9Y6L6 691 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 CNOT1A5YKK6 2376 aaKnown RBP15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 SHROOM3Q8TF72 1996 aa15.2■□□□□ 0.02
PPFIA1-216ENST00000530746 ANKRD36A6QL64 1941 aa15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 TRPM6Q9BX84 2022 aa15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 A0A1W2PPC4 97 aa15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 SSR1P43307 286 aaKnown RBP15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 PAPOLAP51003 745 aaKnown RBP15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 AFF3P51826 1226 aaKnown RBP15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 TAS2R38P59533 333 aa15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 GRIK2Q13002 908 aa15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 ERN2Q76MJ5 926 aaKnown RBP15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 ARHGAP12Q8IWW6 846 aa15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 MINDY1Q8N5J2 469 aa15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 LZTR1Q8N653 840 aa15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 SLC35G2Q8TBE7 412 aa15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 LRIG1Q96JA1 1093 aa15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 CSPG4P5Q96PW8 444 aa15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 HDAC8Q9BY41 377 aa15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 ZDHHC5Q9C0B5 715 aa15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 ZDHHC6Q9H6R6 413 aa15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 EBF2Q9HAK2 575 aa15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 PDFQ9HBH1 243 aa15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 PCDH18Q9HCL0 1135 aa15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 TM9SF3Q9HD45 589 aa15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 UBA2Q9UBT2 640 aaPredicted RBP15.19■□□□□ 0.02
PPFIA1-216ENST00000530746 J3KR12 359 aa15.18■□□□□ 0.02
PPFIA1-216ENST00000530746 LATO43561 262 aa15.18■□□□□ 0.02
PPFIA1-216ENST00000530746 PRAMEF11O60813 436 aa15.18■□□□□ 0.02
PPFIA1-216ENST00000530746 POP4O95707 220 aaKnown RBP15.18■□□□□ 0.02
PPFIA1-216ENST00000530746 AMPD1P23109 780 aa15.18■□□□□ 0.02
PPFIA1-216ENST00000530746 ITGB7P26010 798 aa15.18■□□□□ 0.02
PPFIA1-216ENST00000530746 MAN1A1P33908 653 aa15.18■□□□□ 0.02
PPFIA1-216ENST00000530746 GRIA4P48058 902 aa15.18■□□□□ 0.02
PPFIA1-216ENST00000530746 CSNK1EP49674 416 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms