RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 SQLEQ14534 574 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 C15orf59Q2T9L4 293 aaPredicted RBP7.72□□□□□ -1.17
CTNND1-223ENST00000529986 RFX4Q33E94 735 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 C5orf22Q49AR2 442 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 MFSD14CQ5VZR4 134 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 MZT2AQ6P582 158 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 CLNKQ7Z7G1 428 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 SYT12Q8IV01 421 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 EIF1ADQ8N9N8 165 aaKnown RBP7.72□□□□□ -1.17
CTNND1-223ENST00000529986 SIPA1Q96FS4 1042 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 TBL1YQ9BQ87 522 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 WDR55Q9H6Y2 383 aaPredicted RBP7.72□□□□□ -1.17
CTNND1-223ENST00000529986 TBC1D13Q9NVG8 400 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 NKIRAS2Q9NYR9 191 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 ERAP1Q9NZ08 941 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 C3orf18Q9UK00 162 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 ACTL7BQ9Y614 415 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 APOC4-APOC2K7ER74 178 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 HBP1O60381 514 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 RECQL5O94762 991 aaPredicted RBP7.72□□□□□ -1.17
CTNND1-223ENST00000529986 APOC2P02655 101 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 ALOX5P09917 674 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 VCLP18206 1134 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 KDELR1P24390 212 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 ITGA3P26006 1051 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 SLC7A2P52569 658 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 CDC42P60953 191 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 ADIGQ0VDE8 80 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 KHDC1Q4VXA5 237 aaKnown RBP7.72□□□□□ -1.17
CTNND1-223ENST00000529986 MARC1Q5VT66 337 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 TDRD10Q5VZ19 366 aaKnown RBP7.72□□□□□ -1.17
CTNND1-223ENST00000529986 AAGABQ6PD74 315 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 CRTC3Q6UUV7 619 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 FAM131AQ6UXB0 335 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 KATNAL2Q8IYT4 538 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 CDK20Q8IZL9 346 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 NETO2Q8NC67 525 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 ACER1Q8TDN7 264 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 ZFP14Q9HCL3 533 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 BLOC1S4Q9NUP1 217 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 MCUBQ9NWR8 336 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 PTGFRNQ9P2B2 879 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 KLQ9UEF7 1012 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 CLEC4AQ9UMR7 237 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 IFT172Q9UG01 1749 aa7.72□□□□□ -1.17
CTNND1-223ENST00000529986 IFRD1O00458 451 aaPredicted RBP7.71□□□□□ -1.17
CTNND1-223ENST00000529986 FFAR3O14843 346 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 GPR42O15529 346 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 EPN2O95208 641 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 MT-ND1P03886 318 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 COX7A2P14406 83 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 SREBF1P36956 1147 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 NAMPTP43490 491 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 CYP4F8P98187 520 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 NEK5Q6P3R8 708 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.71□□□□□ -1.17
CTNND1-223ENST00000529986 GALNT5Q7Z7M9 940 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 ADGRA1Q86SQ6 560 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 WDR49Q8IV35 697 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 UBE2J2Q8N2K1 259 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 RP9Q8TA86 221 aaKnown RBP7.71□□□□□ -1.17
CTNND1-223ENST00000529986 ZNF398Q8TD17 642 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 MYLPFQ96A32 169 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 WDR12Q9GZL7 423 aaKnown RBP7.71□□□□□ -1.17
CTNND1-223ENST00000529986 TMEM39BQ9GZU3 492 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 TIMMDC1Q9NPL8 285 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 ING3Q9NXR8 418 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 KLHL28Q9NXS3 571 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 TAS2R13Q9NYV9 303 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 ZNF112Q9UJU3 913 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 MYO5BQ9ULV0 1848 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 SLC12A8A0AV02 714 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 FAM149AA5PLN7 773 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 LRRC10BA6NIK2 292 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 F9P00740 461 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 HPGDP15428 266 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 SLC11A2P49281 568 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 RHOAP61586 193 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 BNIP1Q12981 228 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 TSC22D1Q15714 1073 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 AP5B1Q2VPB7 878 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 PRR5LQ6MZQ0 368 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 SLC25A24Q6NUK1 477 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 GK5Q6ZS86 529 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 PTGR2Q8N8N7 351 aaPredicted RBP7.71□□□□□ -1.17
CTNND1-223ENST00000529986 KAZALD1Q96I82 304 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 ERVK-5Q9HDB9 667 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 PCDHA11Q9Y5I1 949 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 WASF2Q9Y6W5 498 aa7.71□□□□□ -1.17
CTNND1-223ENST00000529986 TOR1BO14657 336 aa7.71□□□□□ -1.18
CTNND1-223ENST00000529986 SIN3BO75182 1162 aa7.71□□□□□ -1.18
CTNND1-223ENST00000529986 GRK4P32298 578 aa7.71□□□□□ -1.18
CTNND1-223ENST00000529986 PNPLA4P41247 253 aa7.71□□□□□ -1.18
CTNND1-223ENST00000529986 SLC5A3P53794 718 aa7.71□□□□□ -1.18
CTNND1-223ENST00000529986 SDE2Q6IQ49 451 aa7.71□□□□□ -1.18
CTNND1-223ENST00000529986 RFWD3Q6PCD5 774 aa7.71□□□□□ -1.18
CTNND1-223ENST00000529986 HHIPL2Q6UWX4 724 aa7.71□□□□□ -1.18
CTNND1-223ENST00000529986 EIF3MQ7L2H7 374 aaKnown RBP7.71□□□□□ -1.18
CTNND1-223ENST00000529986 TRABD2AQ86V40 505 aa7.71□□□□□ -1.18
CTNND1-223ENST00000529986 ARMC8Q8IUR7 673 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms