RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 TDRD3Q9H7E2 651 aaKnown RBP5.29□□□□□ -1.56
CSDE1-212ENST00000529046 FBXO28Q9NVF7 368 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 ZNF112Q9UJU3 913 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 LZTS1Q9Y250 596 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 PCDHAC2Q9Y5I4 1007 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 MORC2Q9Y6X9 1032 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-212ENST00000529046 ECM29Q5VYK3 1845 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 A0A1B0GUL6 1792 aa5.29□□□□□ -1.56
CSDE1-212ENST00000529046 PDS5AQ29RF7 1337 aaKnown RBP5.28□□□□□ -1.56
CSDE1-212ENST00000529046 SPEF2Q9C093 1822 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 EFCAB8A8MWE9 144 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 EYA2O00167 538 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 CLIC1O00299 241 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 PRYO14603 147 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 TLR2O60603 784 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 WDHD1O75717 1129 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-212ENST00000529046 PRR35P0CG20 571 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 DHRS4L1P0CG22 281 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 CETPP11597 493 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 ALADP13716 330 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 CERS1P27544 350 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 PRMT2P55345 433 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 ARL4CP56559 192 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 FAM3BP58499 235 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-212ENST00000529046 WDR5P61964 334 aaKnown RBP5.28□□□□□ -1.56
CSDE1-212ENST00000529046 PPATQ06203 517 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 GAB1Q13480 694 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 PRKG1Q13976 671 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 VGLL4Q14135 290 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 KCNB1Q14721 858 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 MFSD13AQ14CX5 517 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 POSTNQ15063 836 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 BTBD16Q32M84 506 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 LRRC24Q50LG9 513 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 MTX3Q5HYI7 312 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 ATPAF1Q5TC12 328 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-212ENST00000529046 ANO1Q5XXA6 986 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 KLHL17Q6TDP4 642 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 DCDC5Q6ZRR9 648 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 RINLQ6ZS11 566 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 ATG9AQ7Z3C6 839 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 P3H2Q8IVL5 708 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 EXOC8Q8IYI6 725 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 FAM9BQ8IZU0 186 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 EXD3Q8N9H8 876 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-212ENST00000529046 SLC2A12Q8TD20 617 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 FAM151AQ8WW52 585 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 ASB12Q8WXK4 309 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 THAP4Q8WY91 577 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 FAR2Q96K12 515 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 MECRQ9BV79 373 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 TMEM39BQ9GZU3 492 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 PPCSQ9HAB8 311 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 VEZTQ9HBM0 779 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 G6PC2Q9NQR9 355 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 TMOD2Q9NZR1 351 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 C19orf53Q9UNZ5 99 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-212ENST00000529046 TRIM17Q9Y577 477 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 PCDHB2Q9Y5E7 798 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 HTTP42858 3142 aa5.28□□□□□ -1.56
CSDE1-212ENST00000529046 FNDC1Q4ZHG4 1894 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-212ENST00000529046 CYP3A7-CYP3A51PA0A087WV96 503 aa5.27□□□□□ -1.57
CSDE1-212ENST00000529046 LOC102724159A0A0B4J2E5 919 aa5.27□□□□□ -1.57
CSDE1-212ENST00000529046 MBD3L5A6NJ08 208 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-212ENST00000529046 C16orf96A6NNT2 1141 aa5.27□□□□□ -1.57
CSDE1-212ENST00000529046 KIF28PB7ZC32 967 aa5.27□□□□□ -1.57
CSDE1-212ENST00000529046 PRRT4C9JH25 899 aa5.27□□□□□ -1.57
CSDE1-212ENST00000529046 M0QYT0 321 aa5.27□□□□□ -1.57
CSDE1-212ENST00000529046 CXCL11O14625 94 aa5.27□□□□□ -1.57
CSDE1-212ENST00000529046 FRAT2O75474 233 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-212ENST00000529046 CYP2D6P10635 497 aa5.27□□□□□ -1.57
CSDE1-212ENST00000529046 KELP23276 732 aa5.27□□□□□ -1.57
CSDE1-212ENST00000529046 CYP3A7P24462 503 aa5.27□□□□□ -1.57
CSDE1-212ENST00000529046 MPGP29372 298 aa5.27□□□□□ -1.57
CSDE1-212ENST00000529046 ZNF84P51523 738 aa5.27□□□□□ -1.57
CSDE1-212ENST00000529046 RPL15P61313 204 aaKnown RBP5.27□□□□□ -1.57
CSDE1-212ENST00000529046 PPIL2Q13356 520 aa5.27□□□□□ -1.57
CSDE1-212ENST00000529046 MTX1Q13505 466 aa5.27□□□□□ -1.57
CSDE1-212ENST00000529046 BFSP2Q13515 415 aa5.27□□□□□ -1.57
CSDE1-212ENST00000529046 PWP2Q15269 919 aaKnown RBP5.27□□□□□ -1.57
CSDE1-212ENST00000529046 TBRG1Q3YBR2 411 aa5.27□□□□□ -1.57
CSDE1-212ENST00000529046 ZNF626Q68DY1 528 aa5.27□□□□□ -1.57
CSDE1-212ENST00000529046 KYAT3Q6YP21 454 aaKnown RBP5.27□□□□□ -1.57
CSDE1-212ENST00000529046 TBC1D20Q96BZ9 403 aa5.27□□□□□ -1.57
CSDE1-212ENST00000529046 ZNF845Q96IR2 970 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-212ENST00000529046 IDI2Q9BXS1 227 aa5.27□□□□□ -1.57
CSDE1-212ENST00000529046 USP29Q9HBJ7 922 aa5.27□□□□□ -1.57
CSDE1-212ENST00000529046 SAYSD1Q9NPB0 183 aa5.27□□□□□ -1.57
CSDE1-212ENST00000529046 NRIP3Q9NQ35 241 aa5.27□□□□□ -1.57
CSDE1-212ENST00000529046 SIRT4Q9Y6E7 314 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-212ENST00000529046 ARAP2Q8WZ64 1704 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 CCL15-CCL14A0A0B4J2E2 113 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 FAM90A20PA6NIJ5 464 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 TCP10L2B9ZVM9 353 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 ENTPD3O75355 529 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 SGPL1O95470 568 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 CYP21A2P08686 494 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 CYP2A6P11509 494 aaPredicted RBP5.26□□□□□ -1.57
CSDE1-212ENST00000529046 HOXD10P28358 340 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms