RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 CAPN11Q9UMQ6 739 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 BZW2Q9Y6E2 419 aaKnown RBP15.83■□□□□ 0.12
CAPN1-213ENST00000527897 CHD5Q8TDI0 1954 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 RASA4BC9J798 803 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 H0Y8X5 98 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 EEF2KO00418 725 aaKnown RBP15.82■□□□□ 0.12
CAPN1-213ENST00000527897 KRIT1O00522 736 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 RASA4O43374 803 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 KDELR3O43731 214 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 PRPSAP2O60256 369 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 RNGTTO60942 597 aaKnown RBP15.82■□□□□ 0.12
CAPN1-213ENST00000527897 PCDH8O95206 1070 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 CD160O95971 181 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 WNT1P04628 370 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 GYPCP04921 128 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 MYBL1P10243 752 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 SPINK2P20155 84 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 TAS2R38P59533 333 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 CA9Q16790 459 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 SLC45A4Q5BKX6 768 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 PPP6R3Q5H9R7 873 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-213ENST00000527897 ERMARDQ5T6L9 678 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 HGSNATQ68CP4 663 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 ERN2Q76MJ5 926 aaKnown RBP15.82■□□□□ 0.12
CAPN1-213ENST00000527897 RNF214Q8ND24 703 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 HMCESQ96FZ2 354 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 PEBP4Q96S96 227 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 SNRNP25Q9BV90 132 aaKnown RBP15.82■□□□□ 0.12
CAPN1-213ENST00000527897 KLC2Q9H0B6 622 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 TSPY26PQ9H489 355 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 NOL6Q9H6R4 1146 aaKnown RBP15.82■□□□□ 0.12
CAPN1-213ENST00000527897 PREBQ9HCU5 417 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 MRPL47Q9HD33 250 aaKnown RBP15.82■□□□□ 0.12
CAPN1-213ENST00000527897 WASF2Q9Y6W5 498 aa15.82■□□□□ 0.12
CAPN1-213ENST00000527897 A0A1W2PQU0 124 aa15.81■□□□□ 0.12
CAPN1-213ENST00000527897 VILLO15195 856 aa15.81■□□□□ 0.12
CAPN1-213ENST00000527897 SLC31A1O15431 190 aa15.81■□□□□ 0.12
CAPN1-213ENST00000527897 FGF10O15520 208 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-213ENST00000527897 LATO43561 262 aa15.81■□□□□ 0.12
CAPN1-213ENST00000527897 TOP3BO95985 862 aaKnown RBP15.81■□□□□ 0.12
CAPN1-213ENST00000527897 PRLRP16471 622 aa15.81■□□□□ 0.12
CAPN1-213ENST00000527897 MIPP30301 263 aa15.81■□□□□ 0.12
CAPN1-213ENST00000527897 CASP14P31944 242 aa15.81■□□□□ 0.12
CAPN1-213ENST00000527897 CTSKP43235 329 aa15.81■□□□□ 0.12
CAPN1-213ENST00000527897 CCT8P50990 548 aa15.81■□□□□ 0.12
CAPN1-213ENST00000527897 TRIP6Q15654 476 aaKnown RBP15.81■□□□□ 0.12
CAPN1-213ENST00000527897 SETMARQ53H47 684 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-213ENST00000527897 ATXN7L2Q5T6C5 722 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-213ENST00000527897 FBXL19Q6PCT2 694 aa15.81■□□□□ 0.12
CAPN1-213ENST00000527897 ARFGAP1Q8N6T3 406 aa15.81■□□□□ 0.12
CAPN1-213ENST00000527897 SYN2Q92777 582 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-213ENST00000527897 FAM131CQ96AQ9 280 aa15.81■□□□□ 0.12
CAPN1-213ENST00000527897 CELF6Q96J87 481 aaKnown RBP15.81■□□□□ 0.12
CAPN1-213ENST00000527897 KCTD15Q96SI1 283 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-213ENST00000527897 THAP2Q9H0W7 228 aa15.81■□□□□ 0.12
CAPN1-213ENST00000527897 ISCUQ9H1K1 167 aa15.81■□□□□ 0.12
CAPN1-213ENST00000527897 TPX2Q9ULW0 747 aaKnown RBP15.81■□□□□ 0.12
CAPN1-213ENST00000527897 CA5BQ9Y2D0 317 aa15.81■□□□□ 0.12
CAPN1-213ENST00000527897 ZSCAN5CA6NGD5 496 aaPredicted RBP15.8■□□□□ 0.12
CAPN1-213ENST00000527897 GOLGA8CPA6NN73 597 aa15.8■□□□□ 0.12
CAPN1-213ENST00000527897 TMCC1O94876 653 aa15.8■□□□□ 0.12
CAPN1-213ENST00000527897 ZNF883P0CG24 379 aa15.8■□□□□ 0.12
CAPN1-213ENST00000527897 NEK3P51956 506 aa15.8■□□□□ 0.12
CAPN1-213ENST00000527897 SNRPD1P62314 119 aaKnown RBP15.8■□□□□ 0.12
CAPN1-213ENST00000527897 STAT4Q14765 748 aa15.8■□□□□ 0.12
CAPN1-213ENST00000527897 SUZ12Q15022 739 aaKnown RBP15.8■□□□□ 0.12
CAPN1-213ENST00000527897 NAPEPLDQ6IQ20 393 aa15.8■□□□□ 0.12
CAPN1-213ENST00000527897 TRIM69Q86WT6 500 aa15.8■□□□□ 0.12
CAPN1-213ENST00000527897 OR2AP1Q8NGE2 309 aa15.8■□□□□ 0.12
CAPN1-213ENST00000527897 RHBDD1Q8TEB9 315 aa15.8■□□□□ 0.12
CAPN1-213ENST00000527897 ISG20Q96AZ6 181 aaKnown RBP15.8■□□□□ 0.12
CAPN1-213ENST00000527897 IQCDQ96DY2 449 aa15.8■□□□□ 0.12
CAPN1-213ENST00000527897 ZWILCHQ9H900 591 aa15.8■□□□□ 0.12
CAPN1-213ENST00000527897 FZD3Q9NPG1 666 aa15.8■□□□□ 0.12
CAPN1-213ENST00000527897 ARHGAP20Q9P2F6 1191 aa15.8■□□□□ 0.12
CAPN1-213ENST00000527897 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.8■□□□□ 0.12
CAPN1-213ENST00000527897 CABIN1Q9Y6J0 2220 aa15.8■□□□□ 0.12
CAPN1-213ENST00000527897 A0A087X0T9 212 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 A0A1W2PR77 199 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 WASH4PA8MWX3 477 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 FLRT2O43155 660 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 CBFA2T2O43439 604 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 LRCH4O75427 683 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 UGT2B4P06133 528 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 FAM228BP0C875 321 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 ADRB3P13945 408 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 ITGB7P26010 798 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 SSR1P43307 286 aaKnown RBP15.79■□□□□ 0.12
CAPN1-213ENST00000527897 YBEYP58557 167 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-213ENST00000527897 RHOAP61586 193 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 MAPK8IP2Q13387 824 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-213ENST00000527897 SERINC3Q13530 473 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 HNRNPDQ14103 355 aaKnown RBP15.79■□□□□ 0.12
CAPN1-213ENST00000527897 SMTNL2Q2TAL5 461 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 PARP15Q460N3 678 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 CCDC122Q5T0U0 273 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 SEL1L3Q68CR1 1132 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 PARS2Q7L3T8 475 aaKnown RBP15.79■□□□□ 0.12
CAPN1-213ENST00000527897 HORMAD1Q86X24 394 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 FNIP1Q8TF40 1166 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms