RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 CCDC117Q8IWD4 279 aaPredicted RBP17.83■□□□□ 0.44
USH1C-205ENST00000527020 RTL3Q8N8U3 475 aaKnown RBP17.83■□□□□ 0.44
USH1C-205ENST00000527020 TDRD5Q8NAT2 981 aaKnown RBP17.83■□□□□ 0.44
USH1C-205ENST00000527020 KCTD4Q8WVF5 259 aa17.83■□□□□ 0.44
USH1C-205ENST00000527020 MRGPRX2Q96LB1 330 aa17.83■□□□□ 0.44
USH1C-205ENST00000527020 SHCBP1LQ9BZQ2 653 aa17.83■□□□□ 0.44
USH1C-205ENST00000527020 ZNF212Q9UDV6 495 aa17.83■□□□□ 0.44
USH1C-205ENST00000527020 PCDHB8Q9UN66 801 aa17.83■□□□□ 0.44
USH1C-205ENST00000527020 VWA8A3KMH1 1905 aa17.82■□□□□ 0.44
USH1C-205ENST00000527020 H2AFYO75367 372 aaKnown RBP17.82■□□□□ 0.44
USH1C-205ENST00000527020 MOCS2O96007 188 aaPredicted RBP17.82■□□□□ 0.44
USH1C-205ENST00000527020 APOA4P06727 396 aa17.82■□□□□ 0.44
USH1C-205ENST00000527020 SLC10A3P09131 477 aa17.82■□□□□ 0.44
USH1C-205ENST00000527020 NCF2P19878 526 aaPredicted RBP17.82■□□□□ 0.44
USH1C-205ENST00000527020 MPSTP25325 297 aa17.82■□□□□ 0.44
USH1C-205ENST00000527020 NUMBP49757 651 aa17.82■□□□□ 0.44
USH1C-205ENST00000527020 ERFP50548 548 aa17.82■□□□□ 0.44
USH1C-205ENST00000527020 PAPOLAP51003 745 aaKnown RBP17.82■□□□□ 0.44
USH1C-205ENST00000527020 GEMP55040 296 aa17.82■□□□□ 0.44
USH1C-205ENST00000527020 YWHAHQ04917 246 aaPredicted RBP17.82■□□□□ 0.44
USH1C-205ENST00000527020 RANBP10Q6VN20 620 aa17.82■□□□□ 0.44
USH1C-205ENST00000527020 CEP97Q8IW35 865 aa17.82■□□□□ 0.44
USH1C-205ENST00000527020 KLHDC9Q8NEP7 349 aa17.82■□□□□ 0.44
USH1C-205ENST00000527020 RDH11Q8TC12 318 aa17.82■□□□□ 0.44
USH1C-205ENST00000527020 SCG3Q8WXD2 468 aaKnown RBP17.82■□□□□ 0.44
USH1C-205ENST00000527020 OR52B2Q96RD2 323 aa17.82■□□□□ 0.44
USH1C-205ENST00000527020 TREX1Q9NSU2 369 aa17.82■□□□□ 0.44
USH1C-205ENST00000527020 TRMT13Q9NUP7 481 aaKnown RBP17.82■□□□□ 0.44
USH1C-205ENST00000527020 RBM22Q9NW64 420 aaKnown RBP eCLIP17.82■□□□□ 0.44
USH1C-205ENST00000527020 TLK1Q9UKI8 766 aa17.82■□□□□ 0.44
USH1C-205ENST00000527020 LIN7AO14910 233 aaPredicted RBP17.81■□□□□ 0.44
USH1C-205ENST00000527020 PMPCBO75439 489 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 PEX11BO96011 259 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 MYCNP04198 464 aaPredicted RBP17.81■□□□□ 0.44
USH1C-205ENST00000527020 CHRNA4P43681 627 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 GLRBP48167 497 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 NRG1Q02297 640 aaPredicted RBP17.81■□□□□ 0.44
USH1C-205ENST00000527020 CACNB2Q08289 660 aaPredicted RBP17.81■□□□□ 0.44
USH1C-205ENST00000527020 ZNF460Q14592 562 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 SLC39A12Q504Y0 691 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 PIK3R6Q5UE93 754 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 C1orf146Q5VVC0 180 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 LIPMQ5VYY2 423 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 ZNF280BQ86YH2 543 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 AGR3Q8TD06 166 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 STYXQ8WUJ0 223 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 GPR78Q96P69 363 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 DRC3Q9H069 523 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 ATXN3LQ9H3M9 355 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 MRM3Q9HC36 420 aaKnown RBP17.81■□□□□ 0.44
USH1C-205ENST00000527020 E9PBE3 544 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 DCXO43602 365 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 KLHL41O60662 606 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 SMNDC1O75940 238 aaKnown RBP eCLIP17.81■□□□□ 0.44
USH1C-205ENST00000527020 DDHD2O94830 711 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 CD1EP15812 388 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 GLDCP23378 1020 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 FLT3LGP49771 235 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 BTKQ06187 659 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 DLG1Q12959 904 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 PEX6Q13608 980 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 SLC12A1Q13621 1099 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 FAM26DQ5JW98 314 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 SDHAF4Q5VUM1 108 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 PGM2L1Q6PCE3 622 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 POTEHQ6S545 545 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 FRMD7Q6ZUT3 714 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 SCN4BQ8IWT1 228 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 KBTBD2Q8IY47 623 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 ZNF683Q8IZ20 524 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 FSTL5Q8N475 847 aaPredicted RBP17.81■□□□□ 0.44
USH1C-205ENST00000527020 SLC25A41Q8N5S1 370 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 PPHLN1Q8NEY8 458 aaKnown RBP17.81■□□□□ 0.44
USH1C-205ENST00000527020 FAM136AQ96C01 138 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 ENTPD7Q9NQZ7 604 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 MID2Q9UJV3 735 aa17.81■□□□□ 0.44
USH1C-205ENST00000527020 RUVBL2Q9Y230 463 aaKnown RBP17.81■□□□□ 0.44
USH1C-205ENST00000527020 EIF4E1BA6NMX2 242 aaKnown RBP17.8■□□□□ 0.44
USH1C-205ENST00000527020 WASH4PA8MWX3 477 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 MATN2O00339 956 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 CCNT2O60583 730 aaKnown RBP17.8■□□□□ 0.44
USH1C-205ENST00000527020 CABYRO75952 493 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 SORBS2O94875 1100 aaKnown RBP17.8■□□□□ 0.44
USH1C-205ENST00000527020 CCND3P30281 292 aaPredicted RBP17.8■□□□□ 0.44
USH1C-205ENST00000527020 SLC1A2P43004 574 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 GRIA4P48058 902 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 GPR15P49685 360 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 MLLT6P55198 1093 aaPredicted RBP17.8■□□□□ 0.44
USH1C-205ENST00000527020 INHBEP58166 350 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 CNGA3Q16281 694 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 TIGD7Q6NT04 549 aaPredicted RBP17.8■□□□□ 0.44
USH1C-205ENST00000527020 RTN4RL1Q86UN2 441 aaPredicted RBP17.8■□□□□ 0.44
USH1C-205ENST00000527020 LCA5Q86VQ0 697 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 PTCD2Q8WV60 388 aaKnown RBP17.8■□□□□ 0.44
USH1C-205ENST00000527020 TRPV6Q9H1D0 765 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 GPAMQ9HCL2 828 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 FAM95CA0A1B0GW59 222 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 FAM155AB1AL88 458 aaPredicted RBP17.8■□□□□ 0.44
USH1C-205ENST00000527020 COL6A2P12110 1019 aa17.8■□□□□ 0.44
USH1C-205ENST00000527020 ANPEPP15144 967 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms