RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 TRIM73Q86UV7 250 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 EPHX4Q8IUS5 362 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 GPT2Q8TD30 523 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 HMGB4Q8WW32 186 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 KCNJ9Q92806 393 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 USP13Q92995 863 aaPredicted RBP2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 TTC17Q96AE7 1141 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 MTBPQ96DY7 904 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 DDX23Q9BUQ8 820 aaKnown RBP2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 IFT27Q9BW83 186 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 NPFFR1Q9GZQ6 430 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 PDE11AQ9HCR9 933 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 NECTIN3Q9NQS3 549 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 IGKV3D-15A0A087WSY6 115 aa2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 TMEM247A6NEH6 219 aa2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 SLC38A8A6NNN8 435 aa2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 HNRNPDLO14979 420 aaKnown RBP2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 NCK2O43639 380 aa2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 FGF17O60258 216 aa2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 LARGE1O95461 756 aa2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 CH25HO95992 272 aa2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 ATP1A1P05023 1023 aaKnown RBP2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 CDKN1AP38936 164 aa2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 DPP6P42658 865 aa2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 PCP4P48539 62 aa2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 NLRP5P59047 1200 aa2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 CDK18Q07002 472 aa2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 IFIT5Q13325 482 aaKnown RBP2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 ALKBH1Q13686 389 aaKnown RBP2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 SLC35G1Q2M3R5 365 aa2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 PLEKHG6Q3KR16 790 aa2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 FOXL2NBQ6ZUU3 175 aa2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 SLC26A9Q7LBE3 791 aa2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 PATL1Q86TB9 770 aaKnown RBP2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 WDR5BQ86VZ2 330 aa2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 HDAC7Q8WUI4 952 aa2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 BRI3BPQ8WY22 251 aa2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 JDP2Q8WYK2 163 aa2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 TSR2Q969E8 191 aaKnown RBP2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 ZNF385AQ96PM9 386 aaKnown RBP2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 CADM1Q9BY67 442 aaKnown RBP2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 CLK4Q9HAZ1 481 aaKnown RBP2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 DDX21Q9NR30 783 aaKnown RBP eCLIP2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 LRFN1Q9P244 771 aa2.84□□□□□ -1.95
ECHDC1-219ENST00000526299 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 TARSL2A2RTX5 802 aaKnown RBP2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 MBD3L5A6NJ08 208 aaPredicted RBP2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 CHL1O00533 1208 aa2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 SLC22A3O75751 556 aa2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 FGF18O76093 207 aa2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 PMS2P2O95744 297 aa2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 S100BP04271 92 aaPredicted RBP2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 FMO4P31512 558 aa2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 CLCN3P51790 818 aa2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 ADORA2A-AS1P86434 159 aa2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 CALCRLQ16602 461 aa2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 ACCSLQ4AC99 568 aa2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 RFWD2Q8NHY2 731 aa2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 IPO4Q8TEX9 1081 aaKnown RBP2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 C2CD4CQ8TF44 421 aa2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 FRG2BQ96QU4 278 aa2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 OR1F2PQ96R84 312 aa2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 PRPF18Q99633 342 aaKnown RBP2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 NPAS1Q99742 590 aa2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 MSTO1Q9BUK6 570 aa2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 TM7SF3Q9NS93 570 aa2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 LIN7CQ9NUP9 197 aaKnown RBP2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 TMEM51Q9NW97 253 aa2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 DDX43Q9NXZ2 648 aaKnown RBP2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 TCF19Q9Y242 345 aa2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 FAM50BQ9Y247 325 aa2.83□□□□□ -1.96
ECHDC1-219ENST00000526299 GRM8O00222 908 aa2.82□□□□□ -1.96
ECHDC1-219ENST00000526299 EDIL3O43854 480 aa2.82□□□□□ -1.96
ECHDC1-219ENST00000526299 VNN2O95498 520 aa2.82□□□□□ -1.96
ECHDC1-219ENST00000526299 DDAH2O95865 285 aa2.82□□□□□ -1.96
ECHDC1-219ENST00000526299 KRT5P13647 590 aa2.82□□□□□ -1.96
ECHDC1-219ENST00000526299 SLC5A1P13866 664 aa2.82□□□□□ -1.96
ECHDC1-219ENST00000526299 NPPBP16860 134 aa2.82□□□□□ -1.96
ECHDC1-219ENST00000526299 TNFSF4P23510 183 aa2.82□□□□□ -1.96
ECHDC1-219ENST00000526299 ZNF441Q8N8Z8 693 aa2.82□□□□□ -1.96
ECHDC1-219ENST00000526299 OR13A1Q8NGR1 328 aa2.82□□□□□ -1.96
ECHDC1-219ENST00000526299 STT3BQ8TCJ2 826 aa2.82□□□□□ -1.96
ECHDC1-219ENST00000526299 ZNF696Q9H7X3 374 aa2.82□□□□□ -1.96
ECHDC1-219ENST00000526299 LRRC4Q9HBW1 653 aa2.82□□□□□ -1.96
ECHDC1-219ENST00000526299 ZNF334Q9HCZ1 680 aaPredicted RBP2.82□□□□□ -1.96
ECHDC1-219ENST00000526299 SEPSECSQ9HD40 501 aaKnown RBP2.82□□□□□ -1.96
ECHDC1-219ENST00000526299 ZFP57Q9NU63 452 aa2.82□□□□□ -1.96
ECHDC1-219ENST00000526299 OSGIN2Q9Y236 505 aa2.82□□□□□ -1.96
ECHDC1-219ENST00000526299 PAM16Q9Y3D7 125 aa2.82□□□□□ -1.96
ECHDC1-219ENST00000526299 ZNF711Q9Y462 761 aa2.82□□□□□ -1.96
ECHDC1-219ENST00000526299 SNX9Q9Y5X1 595 aa2.82□□□□□ -1.96
ECHDC1-219ENST00000526299 hDV102S1A0JD36 115 aa2.81□□□□□ -1.96
ECHDC1-219ENST00000526299 FAM72CH0Y354 149 aa2.81□□□□□ -1.96
ECHDC1-219ENST00000526299 TIMM23O14925 209 aa2.81□□□□□ -1.96
ECHDC1-219ENST00000526299 KIF1CO43896 1103 aaKnown RBP2.81□□□□□ -1.96
ECHDC1-219ENST00000526299 CLDN14O95500 239 aa2.81□□□□□ -1.96
ECHDC1-219ENST00000526299 RNF224P0DH78 156 aa2.81□□□□□ -1.96
ECHDC1-219ENST00000526299 IGHV4-30-4P0DP06 118 aa2.81□□□□□ -1.96
ECHDC1-219ENST00000526299 CETPP11597 493 aa2.81□□□□□ -1.96
ECHDC1-219ENST00000526299 ATF3P18847 181 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms